DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and x16

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_061512248.1 Gene:x16 / 1277682 VectorBaseID:AGAMI1_014998 Length:231 Species:Anopheles gambiae


Alignment Length:273 Identity:87/273 - (31%)
Similarity:111/273 - (40%) Gaps:87/273 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKN---RRGPP-FAFVEFEDARDADDAVKARD 65
            ::.::|||.|..:...:||::.|..:|     .|:|   .|.|| ||||||||||||:|||:..|
Mosquito     9 HDAKVYVGELGNNASKQDIEEAFGYYG-----PLRNVWVARNPPGFAFVEFEDARDAEDAVRGLD 68

  Fly    66 GYDYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQD 130
            |....|.|.|||...|      |||.       |||  ||||.|             |..|.   
Mosquito    69 GRTISGRRARVELSTG------RGGR-------GGG--GGRGGP-------------PRGGG--- 102

  Fly   131 LKDHMREAGDVCFADTYKDGSGVVEFLRH--EDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDN 193
             |....::.|.|:     :..|...|.|.  ...:...|:....|.||.|     :|.|..|...
Mosquito   103 -KGGRFQSDDRCY-----ECGGRGHFARDCARSGRRGRKRSRSPRSRSRE-----LRTRSRSYSR 156

  Fly   194 DRGGGGGGSGGGGGGSGGGGSRDYRDRSR--------------SRSFSSRPRRR--GTPTYSPVR 242
            .|                ..|||.|.||:              ||..|..|||.  .:|:.|..|
Mosquito   157 SR----------------SRSRDRRSRSKATPKRGAAANNRSLSRDVSKTPRRNVSRSPSRSKSR 205

  Fly   243 --RQSYSRSRSRS 253
              |:|.|||:|||
Mosquito   206 SIRRSLSRSQSRS 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 35/78 (45%)
RRM2_SRSF1_like 115..188 CDD:410013 14/74 (19%)
x16XP_061512248.1 None

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