DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and LOC1270401

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_061498152.1 Gene:LOC1270401 / 1270401 VectorBaseID:AGAMI1_013577 Length:417 Species:Anopheles gambiae


Alignment Length:192 Identity:46/192 - (23%)
Similarity:81/192 - (42%) Gaps:16/192 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP------FAFVEFEDARDADDAVKARDGY 67
            |:||:|.|:|.|:.:::.|..||.::  |.:..|.|.      :.||.|....:|::|:.|.:|.
Mosquito    98 IFVGDLSPEIETQTLKEAFAPFGDIS--DCRVVRDPQTLKSKGYGFVSFVKKTEAENAIAAMNGQ 160

  Fly    68 DYDGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQD-L 131
            ......:|..:.....|.|....|....:.|   .:..:..|...:.|...:.|..|.|..:| |
Mosquito   161 WLGSRSIRTNWATRKPPASKNEINAKPLTFD---EVYNQSSPTNCTVYCGGIGGTLAGGLNEDIL 222

  Fly   132 KDHMREAGDVCFADTYKD-GSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGD 192
            :......|.:.....:|| |...|.|...|...:||..:.:|...|...:.::   .::|||
Mosquito   223 QKTFSPFGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVHNSEINSQTVKCSW---GKESGD 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 21/76 (28%)
RRM2_SRSF1_like 115..188 CDD:410013 17/74 (23%)
LOC1270401XP_061498152.1 None

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