DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SF2 and LOC11175609

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_003436702.2 Gene:LOC11175609 / 11175609 VectorBaseID:AGAMI1_013954 Length:197 Species:Anopheles gambiae


Alignment Length:195 Identity:49/195 - (25%)
Similarity:78/195 - (40%) Gaps:33/195 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFV----DLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
            |..|:.|||.|:...|:|.||.|.||:..|    |..:|:....|||.|.:|::|.|...|.:..
Mosquito    13 CTAYISNLPFDLTNIDVQKLFSKHGKIIKVTILRDKVSRKSKGVAFVLFSNAQEALDCCNACNST 77

  Fly    68 DYDGYRLRVEFPRGGGPGSYRGGNRN--DRSR--DGG--GRM---------GGRGPPAKRSQ--- 114
            :..|..|:....:..|..:.....:.  |:||  :.|  |.|         |.:.||.|:.:   
Mosquito    78 EMFGRTLKASIAKDNGKSAQHAQRKQYPDKSRCYECGTEGHMSYSCPKNVLGNKTPPRKKDRKQA 142

  Fly   115 YRVMVTGLPASGSW-QDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHE 178
            .|.......||..| .|.::.:.       |......:|..:.:::...||.   .||....|.:
Mosquito   143 KRKQPNETTASFDWASDTEEGLT-------ASLEPTTTGCTKKVKYRKSKYF---SDDEELDSED 197

  Fly   179  178
            Mosquito   198  197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 26/76 (34%)
RRM2_SRSF1_like 115..188 CDD:410013 12/65 (18%)
LOC11175609XP_003436702.2 None

Return to query results.
Submit another query.