Protein Alignment SF2 and SNRNP35

DIOPT Version :9

• Sequence 1: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_851030.1
• Gene: SNRNP35 / 11066
• HGNCID: 30852
• Length: 251
• Species: Homo sapiens
• Alignment Length: 206
• Identity: 45/206 - (21%)
• Similarity: 77/206 - (37%)
• Gaps: 70/206 - (33%)

  Fly     9 IYVGNLPPDIRTKD--IQDLFHKFGKVTFV----DLKNRRGPPFAFVEFEDARDADDAVKARDGY 67
            ::|..|  :::||:  ::::|.::|.:..:    ||.......:||:|:::.|....|.:..||.
Human    58 LFVARL--NLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGL 120

  Fly    68 DYDGYRLRVEF----------PR--GGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVT 120
            ..|.:.:.|::          ||  |||.|.        :...|..|.|||..|.::.      .
Human   121 VIDQHEIFVDYELERTLKGWIPRRLGGGLGG--------KKESGQLRFGGRDRPFRKP------I 171

  Fly   121 GLPASGSWQDLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIR 185
            .||                 |...|.|::|                |:....|.||.|   .:..
Human   172 NLP-----------------VVKNDLYREG----------------KRERRERSRSRE---RHWD 200

  Fly   186 VREDSGDNDRG 196
            .|....|:|||
Human   201 SRTRDRDHDRG 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	17/86 (20%)
		RRM2_SRSF1_like	115..188	CDD:410013	11/72 (15%)
SNRNP35	NP_851030.1	RRM_snRNP35	53..142	CDD:240683	17/85 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.900