DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF2 and RBM7

DIOPT Version :10

Sequence 1:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens


Alignment Length:243 Identity:54/243 - (22%)
Similarity:87/243 - (35%) Gaps:53/243 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IYVGNLPPDIRTKDIQDLFHKFGKVTFVDL-KNRRGPP--FAFVEFEDARDADDAVKARDGYDYD 70
            ::||||...:..:.:.:|||:.|.|..|.: |::.|.|  ||||.|:.......|:...:|....
Human    12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLY 76

  Fly    71 GYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHM 135
            |..::::|..|.....      .|.|........|...|          |....|..::...|:|
Human    77 GRPIKIQ
FRSGSSHAP------QDVSLSYPQHHVGNSSP----------TSTSPSSRYERTMDNM 125

  Fly   136 REAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGGGGG 200
            ..:..:    ..:..|....|.|...|..|::            :::|                |
Human   126 TSSAQI----IQRSFSSPENFQRQAVMNSALR------------QMSY----------------G 158

  Fly   201 GSGGGGGGSGGGGSRDYRDRSRSRSFSSRPR-RRGTP-TYSPVRRQSY 246
            |..|.......|.|...:..|.|.:.||..: |:||| :...||..||
Human   159 GKFGSSPLDQSGFSPSVQSHSHSFNQSSSSQWRQGTPSSQRKVRMNSY 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 22/73 (30%)
RRM2_SRSF1_like 115..188 CDD:410013 10/72 (14%)
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005 21/70 (30%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35 3/9 (33%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76 2/16 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267 14/44 (32%)

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