Protein Alignment SF2 and srsf3b

DIOPT Version :10

• Sequence 1: NP_652611.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Sequence 2: NP_958480.2
• Gene: srsf3b / 100145909
• ZFINID: ZDB-GENE-071005-2
• Length: 164
• Species: Danio rerio
• Alignment Length: 255
• Identity: 73/255 - (28%)
• Similarity: 89/255 - (34%)
• Gaps: 107/255 - (41%)

  Fly     6 ECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKARDGYDY 69
            :|::|||||..:....:::..|..:|.:..|.:  .|.|| ||||||||.|||.|||:..||...
Zfish     8 DCKVYVGNLGNNGNKSELERAFGYYGPLRSVWV--ARNPPGFAFVEFEDPRDATDAVRELDGRTL 70

  Fly    70 DGYRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDH 134
            .|.|:|||...|           ..|:|       .||||.                ||..
Zfish    71 CGCRVRVELSNG-----------EKRTR-------SRGPPP----------------SWNR---- 97

  Fly   135 MREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGGGG 199
                                            :..||.|.||...:    |.|..
Zfish    98 --------------------------------RPRDDYRRRSSPPQ----RRRSP---------- 116

  Fly   200 GGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTP-----TYSPVRRQSYSRSRSRSN 254
                          .|....||||||| ||.|||...     .:.|.|..|.||||||||
Zfish   117 --------------RRRSFSRSRSRSF-SRERRRERSLSRERNHKPSRSFSRSRSRSRSN 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SF2	NP_652611.1	RRM_SF	3..80	CDD:473069	33/74 (45%)
		RRM2_SRSF1_like	115..188	CDD:410013	8/72 (11%)
srsf3b	NP_958480.2	RRM_SRSF3	5..85	CDD:241089	34/89 (38%)