DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spt5 and AT2G34210

DIOPT Version :10

Sequence 1:NP_652610.1 Gene:Spt5 / 53442 FlyBaseID:FBgn0040273 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_180968.2 Gene:AT2G34210 / 817982 AraportID:AT2G34210 Length:989 Species:Arabidopsis thaliana


Alignment Length:1099 Identity:324/1099 - (29%)
Similarity:512/1099 - (46%) Gaps:195/1099 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SRSGSESPQRRDNRGKSDESGEEEEEPPG--EDIDSEEYDEEENDDHPRKKKKKERFGGFIID-E 118
            |:...:.....|:....||..|:|.||..  :....::.....:|...|:..||:..|...|| |
plant     2 SQYSDDDYSHEDDSEMEDEDEEDEYEPRSSRKGRSGKKRGRSNSDSDGRRGSKKKSSGSAFIDWE 66

  Fly   119 AEVDDEVDEDD---EWEEGANEIG--------IVGNEIDELGPTARDIEIRR----RGTNLWDTQ 168
            .||||:|::||   :.|:|..::.        ||..|.|.  |. .|.:.||    ||.:..: :
plant    67 VEVDDDVEDDDDDVDVEDGKQQLKFGDFSLCFIVSGEADL--PN-EDSDHRRQYYQRGFHPHE-E 127

  Fly   169 KEDEIE----EYLRKKYADESIAKRHFGDGGEEMSD--EITQQTLLPGIKDPNLWMVKCRIGEEK 227
            ..||:|    |.|..|||.:..          |:.|  ::.||.|||.::||.||:|||.||.|:
plant   128 DVDELEKRTLERLSTKYAKDDY----------ELDDVNDVDQQALLPSVRDPKLWLVKCAIGRER 182

  Fly   228 ATALLLMRKYLTYLNTDDPLQIKSIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMV 292
            ..|:.||:|   .::.....:|:|.||.:.::.|:|:||..:.|||..|..:.|:...: |..:|
plant   183 EVAVCLMQK---IVDRGSEFKIRSAIALDHLQNYVYIEADMEAHVKEAIKGMRNIYANQ-KILLV 243

  Fly   293 PIKEMTDVLKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGAL 357
            ||||||.||.|..:.:.|....|||:|.|:||.|:|||..||..:.:|.:||:||||...:...|
plant   244 PIKEMTAVLSVESKAIDLSRDSWVRMKLGIYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANKL 308

  Fly   358 RTTATESDDSKRKKKRRPAAKPFDPEAVRAIGGEVH---------SDGDFLLFEGNRYSRKGFLY 413
                 |..::.:||...|..:..:.:..|    |:|         ..||:....|....:.||||
plant   309 -----EGTENVKKKAFAPPPRFMNIDEAR----ELHIRVEHRRDPMTGDYFENIGGMLFKDGFLY 364

  Fly   414 KNFTMSAILSDGVKPTLAELERFEESPEEVNLEIMGTVKDDPTM------AHSFSMGDNVEVCVG 472
            |..:..:|.:..|.||..|||||:...|...::.:    |:.|:      .| |..||.|.|..|
plant   365 KKVSTKSIAAQNVTPTFDELERFKRPNENGEIDFV----DESTLFANRKKGH-FMKGDAVIVIKG 424

  Fly   473 DLENLQAKIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVE 537
            ||:||:..|..:|...:.:..:.:||.:|:.....||.|||:.|:..:|::|.:||.||:|::|:
plant   425 DLKNLKGWIEKVDEENVLIRSEMKDLPNPIAVNGRELCKYFEPGNFVKVVSGIHEGGTGMIVKVD 489

  Fly   538 PTRVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDMVQLDSQNVGVIVRLERENFHVL 602
            ...::::||.|...:.|....:...::|..||..:|.::..|:|.|...:.|||::|:.|...:|
plant   490 QHMLIILSDTTKEHICVFADHVAKSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLDSEAIQIL 554

  Fly   603 GMNGKCI-ECKPTALHKRKENRHTV-----ALDADQNQIRRRDVVKVMEGPHAGRSGEIKHLYRS 661
                |.: :....::.|..|.::.:     ..|..:|.:..:|||:|:|||..|:.|.:..:|:.
plant   555 ----KGVPDSSEVSIVKASEIKYKIWKKINVQDRYKNVVAVKDVVRVIEGPSKGKQGPVVQIYKG 615

  Fly   662 LAFLHCRMYTENGGIFVCKTRHLQLAGGSKTTVSNAGIVGGLGFMSPRIQSP-----------MH 715
            :.|:|.|...|:.| |:|            |..|:..:.|| .|.:|.:..|           .:
plant   616 VLFIHDRHNLEHTG-FIC------------TRCSSCVLAGG-NFKTPALVPPSPRRFQRADMGYN 666

  Fly   716 PSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATESTARVELHTSCQTIS 780
            |..| |...|.||.||      |..::|..:||..||:||..|.:.:..:...||||  ..:.::
plant   667 PGAG-GRHQGGRGRRG------DDHLVGTYVKIRLGPFKGYSGRLVEVKDKLVRVEL--EAKIVT 722

  Fly   781 VDRNHIAIVGVTGKEGSVSTYGRTPARTPGY--GAQTPSYTAAGSKTPLVGSQTPNWDTDTRTPY 843
            |:|.            ::|........||.|  |:|||.:.   |:|||....||       ..:
plant   723 VERK------------AISDMTDNVVATPQYNMGSQTPMHP---SRTPLHPCMTP-------MRH 765

  Fly   844 GTMTPSHDGSMTPRHG-AWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPGYQMTSQFAPQTPG 907
            ...||.|||..||..| ||:|....:|.|:|              :....||...||.:...|||
plant   766 SGATPIHDGMRTPMRGRAWNPYMPMSPPRDN--------------WEDGNPGSWGTSPYEAATPG 816

  Fly   908 TLYGSD----RSY----SPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTPGGIPQSPYNPQTPGAS 964
            :.:||.    .||    :|.|.:.:|:|.        |||.::|.|.||||      ...|||..
plant   817 SDWGSSTPGRSSYRDAGTPINNANAPSPM--------TPSSTSYLPTTPGG------QAMTPGTD 867

  Fly   965 LDSSMGDWCTTDIEVR------IHTH---DDTDLVGQTGIIRTV-SNGVCSVFL--RQEDRSVSI 1017
            ||....| ...|.|.|      ::.|   :|.:    .|:||.| .:|.|.|.|  |.|..::..
plant   868 LDVMSLD-IGGDAETRFIPGILVNVHKAGEDRN----PGVIRDVLPDGSCVVALGHRGEGETIRA 927

  Fly  1018 VSEHLAPVLPCNGDEFKIIYGDDRESVGRVLSKDGDVFVCRINE--EIKLLPINFLCKM 1074
            ....::.|.|...:..||:.|....|..:|:.:||...:.:::|  :||:|.:..|.|:
plant   928 TQNKVSLVCPKKNERVKILGGKYCGSTAKVIGEDGQDGIVKLDESLDIKILKLTILAKL 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt5NP_652610.1 Spt5_N <139..209 CDD:463406 23/87 (26%)
NGN_Euk 215..302 CDD:193577 34/86 (40%)
KOW_Spt5_1 313..350 CDD:240505 19/36 (53%)
KOW_Spt5_2 461..511 CDD:240506 17/49 (35%)
KOW_Spt5_3 512..562 CDD:240507 15/49 (31%)
KOW_Spt5_4 638..680 CDD:240508 16/41 (39%)
KOW_Spt5_5 737..788 CDD:240509 15/50 (30%)
CTD 812..908 CDD:215026 30/96 (31%)
KOW_Spt5_6 1020..1075 CDD:240510 15/57 (26%)
AT2G34210NP_180968.2 NGN_Euk 170..253 CDD:193577 34/86 (40%)
KOW_Spt5_1 264..301 CDD:240505 19/36 (53%)
KOW_Spt5_2 413..463 CDD:240506 17/49 (35%)
KOW_Spt5_3 464..514 CDD:240507 15/49 (31%)
KOW_Spt5_4 598..634 CDD:240508 13/48 (27%)
KOW 682..729 CDD:469738 15/60 (25%)
CTD 738..866 CDD:215026 53/165 (32%)
KOW_Spt5_6 930..987 CDD:240510 15/57 (26%)

Return to query results.
Submit another query.