DRSC/TRiP Functional Genomics Resources

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Protein Alignment pont and RVB2

DIOPT Version :9

Sequence 1:NP_652608.1 Gene:pont / 53439 FlyBaseID:FBgn0040078 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_015089.1 Gene:RVB2 / 855841 SGDID:S000006156 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:446 Identity:183/446 - (41%)
Similarity:284/446 - (63%) Gaps:22/446 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IAAHSHVKGLGLDEVGAAVHSAAGLVGQKAAREAAGIVVDLIKSKKMAGRALLLAGPPGTGKTAI 79
            ||||||:.||||||......::.|:|||..||.|||:::.::::..:||||:|:||||.|||||:
Yeast    20 IAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTAL 84

  Fly    80 ALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETE 144
            |:.::|.||..|||..:.|||:||.|:.|||.|.:.||:|||::|:|..|:.||||.|   ::.:
Yeast    85 AMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVE---IQID 146

  Fly   145 NPM-GGY--GKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIEANSGAVKRQGRS 206
            ..: ||:  ||      :.:||.......:|...:.|.|.||||..||||.|:..||.:.:.|||
Yeast   147 RSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRS 205

  Fly   207 DTFATEFDL--ETEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARPQGGQDVLSMMGQLMKPKKT 269
            ...:.::|.  ....:|..|:|::.|:|.|:..|:||::||.|:|.||       ...|......
Yeast   206 FARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG-------FLALFTGDTG 263

  Fly   270 EITDKLRMEINKVVNKYIDQGIAELVPGVLFIDEIHMLDLETFTYLHKSLESPIAPIVIFATNRG 334
            ||..::|.:||..|.::.::|.||:|||||||||:||||:|.|::::::||...||||:.|||||
Yeast   264 EIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRG 328

  Fly   335 RCVIRGTTDIVSPHGIPLDLLDRLLIIRTLLYSTADMEQIIKLRAQTEGLQLEENAFTRLSEIGT 399
            ....|| |:..||||:|||||||.:||.|..|:..:::.|:.:|||.|.::|..:|...|::.|.
Yeast   329 VSKTRG-TNYKSPHGLPLDLLDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGV 392

  Fly   400 SSTLRYAVQLLTPAHQMCKVNGRNQISKDDIEDVHSLFLDAKRSSKHLSEKNNKFM 455
            .::|||:..|::.|.|:......|.:..:|::..:.||||:.||.|::.|..::::
Yeast   393 ETSLRYSSNLISVAQQIAMKRKNNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pontNP_652608.1 TIP49 14..413 CDD:283678 171/402 (43%)
P-loop_NTPase 40..>80 CDD:304359 22/39 (56%)
P-loop_NTPase 66..>110 CDD:304359 24/43 (56%)
RVB2NP_015089.1 TIP49 4..448 CDD:224145 183/444 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1224
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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