DRSC/TRiP Functional Genomics Resources

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Protein Alignment pont and rvb1

DIOPT Version :9

Sequence 1:NP_652608.1 Gene:pont / 53439 FlyBaseID:FBgn0040078 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_594783.1 Gene:rvb1 / 2543227 PomBaseID:SPAPB8E5.09 Length:456 Species:Schizosaccharomyces pombe


Alignment Length:445 Identity:302/445 - (67%)
Similarity:372/445 - (83%) Gaps:0/445 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIEEVKSTVRTQRIAAHSHVKGLGLDEVGAAVHSAAGLVGQKAAREAAGIVVDLIKSKKMAGRA 65
            ::|.|||...|..||..|||:|||||.|.|.......|.:||:.||||.||:.|||||||..|:.
pombe     2 VQISEVKGNGRDNRITTHSHIKGLGLKEDGTCESVGGGFIGQEKAREACGIITDLIKSKKFGGKG 66

  Fly    66 LLLAGPPGTGKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEV 130
            :|.||..||||||:|||||||||.||||||||||||:|:||||||.|||||||:||||::|||||
pombe    67 VLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEALMENFRRAIGLRVKETKEV 131

  Fly   131 YEGEVTELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIEA 195
            |||||||:.|.|.|||:||||||||:|::||||.||||||||||||:::||:|:|..||||||||
pombe   132 YEGEVTEMVPEEAENPLGGYGKTISHVLLGLKTHKGTKQLKLDPSIYESLQREQVSTGDVIYIEA 196

  Fly   196 NSGAVKRQGRSDTFATEFDLETEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARPQGGQDVLSMM 260
            |:|||||.||||.:|||||||.|||||:|||:|||:||::|||||||||:||||||||||::|||
pombe   197 NTGAVKRVGRSDAYATEFDLEAEEYVPMPKGEVHKRKEIVQDVTLHDLDIANARPQGGQDIMSMM 261

  Fly   261 GQLMKPKKTEITDKLRMEINKVVNKYIDQGIAELVPGVLFIDEIHMLDLETFTYLHKSLESPIAP 325
            ||||||||||||||||.||||||||||:||||||:||||||||:||||:|.||||:::|||.|:|
pombe   262 GQLMKPKKTEITDKLRGEINKVVNKYIEQGIAELIPGVLFIDEVHMLDIECFTYLNQALESTISP 326

  Fly   326 IVIFATNRGRCVIRGTTDIVSPHGIPLDLLDRLLIIRTLLYSTADMEQIIKLRAQTEGLQLEENA 390
            |||||:|||.|.||||.||.:|||||.||||||||:|||.||.:::..|:::||:.|.:.|.:..
pombe   327 IVIFASNRGICTIRGTEDIQAPHGIPTDLLDRLLIVRTLPYSESEIRSILQIRAKVENIILTDEC 391

  Fly   391 FTRLSEIGTSSTLRYAVQLLTPAHQMCKVNGRNQISKDDIEDVHSLFLDAKRSSK 445
            ..:|::.|:.::|||.:|||||...:..::|..:|...|||:.:.|||||:||::
pombe   392 LDKLAQEGSRTSLRYVIQLLTPVSIIASLHGNKEIGVQDIEECNDLFLDARRSAQ 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pontNP_652608.1 TIP49 14..413 CDD:283678 284/398 (71%)
P-loop_NTPase 40..>80 CDD:304359 25/39 (64%)
P-loop_NTPase 66..>110 CDD:304359 35/43 (81%)
rvb1NP_594783.1 TIP49 1..456 CDD:224145 302/445 (68%)
AAA 41..>131 CDD:99707 67/89 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 555 1.000 Domainoid score I38
eggNOG 1 0.900 - - E1_COG1224
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37839
Inparanoid 1 1.050 622 1.000 Inparanoid score I149
OMA 1 1.010 - - QHG53734
OrthoFinder 1 1.000 - - FOG0004646
OrthoInspector 1 1.000 - - oto101426
orthoMCL 1 0.900 - - OOG6_101792
Panther 1 1.100 - - LDO PTHR11093
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1271
SonicParanoid 1 1.000 - - X3263
TreeFam 1 0.960 - -
1413.860

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