DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pont and ruvb-2

DIOPT Version :9

Sequence 1:NP_652608.1 Gene:pont / 53439 FlyBaseID:FBgn0040078 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_501067.1 Gene:ruvb-2 / 177458 WormBaseID:WBGene00020687 Length:448 Species:Caenorhabditis elegans


Alignment Length:453 Identity:185/453 - (40%)
Similarity:281/453 - (62%) Gaps:17/453 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VKSTVRTQRIAAHSHVKGLGLDEVGAAVHSAAGLVGQKAAREAAGIVVDLIKSKKMAGRALLLAG 70
            ||..|:.:|.:.|||:.||||::...|.:.:.|:|||.|||:|||::|.:|:..|:||||||:.|
 Worm     9 VKDIVKVERTSVHSHITGLGLNDRLEAEYVSGGMVGQVAARQAAGLIVKMIQEGKIAGRALLVTG 73

  Fly    71 PPGTGKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEV 135
            .||.||||||:||::|||...||..:|.||::||||.|||.|.:.|||::|::|:|..||.||||
 Worm    74 EPGAGKTAIAIAISKELGEDTPFVSIVASEIYSNEINKTEALTQAFRRALGIQIKEETEVLEGEV 138

  Fly   136 TELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIEANSGAV 200
            ..|   |.:....|.|..:..:.  ::|........|...:.||..||||..||||.::..||.|
 Worm   139 ISL---EVDRSANGMGPKVGKLT--MRTTDMETIYDLGSKMVDACLKEKVMPGDVIQVDKASGRV 198

  Fly   201 KRQGRSDTFATEFDL--ETEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARPQGGQDVLSMMGQL 263
            .|.|||...:.::|.  ...:.|..|.|::.|::|.:..|.|||:||.|:|.||       ...|
 Worm   199 TRLGRSFNRSHDYDAMGPKVKLVQCPDGEIQKRRETVHTVCLHDIDVINSRTQG-------YVAL 256

  Fly   264 MKPKKTEITDKLRMEINKVVNKYIDQGIAELVPGVLFIDEIHMLDLETFTYLHKSLESPIAPIVI 328
            ......||..::|.:|||.|.::.::|.|:.|||||||||.||||:|.|::|::::|..::|::|
 Worm   257 FSGDTGEIKAEVRDQINKKVLEWREEGKAKFVPGVLFIDEAHMLDIECFSFLNRAIEGELSPLII 321

  Fly   329 FATNRGRCVIRGTTDIVSPHGIPLDLLDRLLIIRTLLYSTADMEQIIKLRAQTEGLQLEENAFTR 393
            .||||....:|| ||:.|.||||.|.|||:|||..:.|:..|..:|:.:|...||::|:..|...
 Worm   322 MATNRLIEKVRG-TDVESAHGIPSDFLDRMLIINAIPYTKEDTAKILSIRCDEEGVKLQPTALDL 385

  Fly   394 LSEIGTSSTLRYAVQLLTPAHQMCKVNGRNQI-SKDDIEDVHSLFLDAKRSSKHLSEKNNKFM 455
            |.::..:::|||.:.|:. |.::.::..:.:| :.|.|...:.||.|.|||.|.|:|::..|:
 Worm   386 LVKLQEATSLRYCIHLIA-ASEVIRIRSKAEIVTTDHIGSAYRLFFDTKRSEKILTEESAGFL 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pontNP_652608.1 TIP49 14..413 CDD:283678 168/400 (42%)
P-loop_NTPase 40..>80 CDD:304359 25/39 (64%)
P-loop_NTPase 66..>110 CDD:304359 26/43 (60%)
ruvb-2NP_501067.1 TIP49 17..408 CDD:283678 169/404 (42%)
P-loop_NTPase 69..>122 CDD:304359 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1224
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D273414at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.