Sequence 1: | NP_652607.1 | Gene: | RecQ4 / 53438 | FlyBaseID: | FBgn0040290 | Length: | 1579 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001330792.1 | Gene: | RECQSIM / 832830 | AraportID: | AT5G27680 | Length: | 858 | Species: | Arabidopsis thaliana |
Alignment Length: | 1008 | Identity: | 226/1008 - (22%) |
---|---|---|---|
Similarity: | 359/1008 - (35%) | Gaps: | 374/1008 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 667 MGG--CDGGVLTCF----QCGGVGHFAQQCKVKGDSLLPLSAQLEEDPSPFPTLAEAQEMASQGA 725
Fly 726 VVAHSRNISRLPQAANAAILQGDELNESEEDDQESSGDEEVQQHPDPNWSSDEMDVDFEALDAAV 790
Fly 791 EASLSQPVSQEKAASPIKTYVGHKIPEEFLKQAGLDTTASSSNRSQHGGVKPLYDLLPDGSVQDT 855
Fly 856 TPEVLEALHMFGHTNFRKGQDRAIMRTLSGLSSLVTLSTGSGKSLCYQLPAYLYSRKVGAITLVI 920
Fly 921 SPLVSLMEDQVTGVPHFLRAHCLHTNQTAPQRMKIQQ-MIANGEID-------------ILLVSP 971
Fly 972 EAVVAGERATGFGAILRQLPP---------IAFACIDEAHCVSQWSHNFRPSYLMICKVLRKNLG 1027
Fly 1028 VRT---------VLGLTATATLPTRVSIINHLGISDGERGIISDIPLPD---------------- 1067
Fly 1068 -----NLVLSVSKDENRDAALLQLLNSER-----FEPCQSIIIYCTRRDE--------------- 1107
Fly 1108 -----------------------------------CE------------RIAGFIRTCVQDRREP 1125
Fly 1126 TQDQTKKRKRVNWQAEPYHAGMPASRRRTVQKAFMSNELRIVVATIAFGMGINKPDIRAVIHYNM 1190
Fly 1191 PRNFESYVQEIGRAGRDGLPSHCHLFLD----------AKGGDQSELRRHVYSNSIDRHVIR--K 1243
Fly 1244 LLQKIFVPCSCDKEASKRTALPIPLEGDGPRVHMCPGHEIGFSVEKTVEMLDIPAENISTLL--- 1305
Fly 1306 ---CYMELDPRWCISVLSSAYVMAKVISYGGPKYLKHAAKECPPLAMAIALQIRDKTFKEDSNII 1367
Fly 1368 EFSVTDIAAGIGWNSGVVKYQLKDLEWVKVNGYPKRSPITVSFYDLGFRIKVPGDFTESEIDNAL 1432
Fly 1433 DTLYTRSVKQERTQLIQLQYVAHGLAAVAYSSCGQCCNADFPQDRG-EQLKAIVRNYFANDYPQD 1496
Fly 1497 LELEIEPSNVPDENIIDDVHALINMYPDNTFTG 1529 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RecQ4 | NP_652607.1 | RecQL4_SLD2_NTD | 9..55 | CDD:421279 | |
RecQ | 864..>1218 | CDD:223588 | 133/473 (28%) | ||
RECQSIM | NP_001330792.1 | UBA_like_SF | 8..42 | CDD:304366 | 5/12 (42%) |
DEXDc | 162..355 | CDD:214692 | 73/225 (32%) | ||
DEAD | 170..341 | CDD:278688 | 68/203 (33%) | ||
HELICc | 486..600 | CDD:238034 | 43/114 (38%) | ||
RecQ_Zn_bind | 612..663 | CDD:292742 | 10/69 (14%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0514 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D445763at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |