Sequence 1: | NP_652607.1 | Gene: | RecQ4 / 53438 | FlyBaseID: | FBgn0040290 | Length: | 1579 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_195299.2 | Gene: | RecQl3 / 829727 | AraportID: | AT4G35740 | Length: | 713 | Species: | Arabidopsis thaliana |
Alignment Length: | 413 | Identity: | 144/413 - (34%) |
---|---|---|---|
Similarity: | 205/413 - (49%) | Gaps: | 67/413 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 847 LPDGSVQDTTPEVL--EAL------HMFGHTNFRKGQDRAIMRTLSGLSSLVTLSTGSGKSLCYQ 903
Fly 904 LPAYLYSRKVGAITLVISPLVSLMEDQVTGVPH-FLRAHCLHTNQTAPQRMKIQQMIANGE--ID 965
Fly 966 ILLVSPEAVVAGERATGFGAILRQLPP---IAFACIDEAHCVSQWSHNFRPSYLMICKVLRKNLG 1027
Fly 1028 VRTVLGLTATATLPTRVSIINHLGI--------SDGERGIISDIPLPDNLVLSVSKDENRDAALL 1084
Fly 1085 QLLNSERFEPCQSI--IIYCTRRDECERIAGFIRTCVQDRREPTQDQTKKRKRVNWQAEPYHAGM 1147
Fly 1148 PASRRRTVQKAFMSNELRIVVATIAFGMGINKPDIRAVIHYNMPRNFESYVQEIGRAGRDGLPSH 1212
Fly 1213 CHLFLDAKGGDQSELRRHVYSNS 1235 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RecQ4 | NP_652607.1 | RecQL4_SLD2_NTD | 9..55 | CDD:421279 | |
RecQ | 864..>1218 | CDD:223588 | 132/369 (36%) | ||
RecQl3 | NP_195299.2 | DEXDc | 32..235 | CDD:214692 | 76/211 (36%) |
DEAD | 41..207 | CDD:278688 | 67/174 (39%) | ||
HELICc | 229..359 | CDD:238034 | 55/159 (35%) | ||
RecQ_Zn_bind | 364..427 | CDD:292742 | 2/12 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0514 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D445763at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |