Sequence 1: | NP_652607.1 | Gene: | RecQ4 / 53438 | FlyBaseID: | FBgn0040290 | Length: | 1579 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006237679.1 | Gene: | Recql / 312824 | RGDID: | 1311071 | Length: | 645 | Species: | Rattus norvegicus |
Alignment Length: | 474 | Identity: | 141/474 - (29%) |
---|---|---|---|
Similarity: | 217/474 - (45%) | Gaps: | 110/474 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 841 KPLYDLLPDGSVQ-----DTTP------------EVLEALH-MFGHTNFRKGQDRAIMRTLSGLS 887
Fly 888 SLVTLSTGSGKSLCYQLPAYLYSRKVGAITLVISPLVSLMEDQV-----TGVPHFL------RAH 941
Fly 942 --CLHTNQTAPQRMKIQQMIANGEIDILLVSPEAVVAG-------ERATGFGAILRQLPPIAFAC 997
Fly 998 IDEAHCVSQWSHNFRPSYLMICKVLRKNLGVRTVLGLTATATLPTRVSIINHLGISDGERGIISD 1062
Fly 1063 IPLP-------DNLVLSV----SKDENRDAALLQLLNSERFEPCQSIIIYCTRRDECERIAGFIR 1116
Fly 1117 TCVQDRREPTQDQTKKRKRVNWQAEPYHAGMPASRRRTVQKAFMSNELRIVVATIAFGMGINKPD 1181
Fly 1182 IRAVIHYNMPRNFESYVQEIGRAGRDGLPSHCHLFLDAKGGDQSELRRHVYSNSIDRHVIRKLLQ 1246
Fly 1247 KIFVPCS-CDKEASKRTAL 1264 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RecQ4 | NP_652607.1 | RecQL4_SLD2_NTD | 9..55 | CDD:421279 | |
RecQ | 864..>1218 | CDD:223588 | 123/385 (32%) | ||
Recql | XP_006237679.1 | recQ_fam | 82..543 | CDD:129701 | 134/436 (31%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0514 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D445763at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |