| Sequence 1: | NP_652607.1 | Gene: | RecQ4 / 53438 | FlyBaseID: | FBgn0040290 | Length: | 1579 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001099323.1 | Gene: | Recql5 / 287834 | RGDID: | 1310823 | Length: | 973 | Species: | Rattus norvegicus |
| Alignment Length: | 415 | Identity: | 136/415 - (32%) |
|---|---|---|---|
| Similarity: | 207/415 - (49%) | Gaps: | 85/415 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 865 MFGHTNFRKG-QDRAIMRTLSGLSSL-VTLSTGSGKSLCYQLPAYLYSRKVGAITLVISPLVSLM 927
Fly 928 EDQVTGVPHFL----RAHCLHTNQTAPQRMKIQQMIANGEID-----ILLVSPE-AVVAGERATG 982
Fly 983 FGAILRQLPPIAFACIDEAHCVSQWSHNFRPSYLMICKVLRKNLGVRTVLGLTATATLPTRVSII 1047
Fly 1048 NHLGISDG---------ERGIISDIP----LPD---NLVLSVSKDENRD---AALLQLLNSERFE 1093
Fly 1094 PCQSIIIYCTRRDECERIAGFIRTCVQDRREPTQDQTKKRKRVNWQAEPYHAGMPASRRRTVQKA 1158
Fly 1159 FMSNELRIVVATIAFGMGINKPDIRAVIHYNMPRNFESYVQEIGRAGRDGLPSHCHLFLDAKGGD 1223
Fly 1224 QSELRRHVYSNSIDRHVIRKLLQKI 1248 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RecQ4 | NP_652607.1 | RecQL4_SLD2_NTD | 9..55 | CDD:421279 | |
| RecQ | 864..>1218 | CDD:223588 | 129/383 (34%) | ||
| Recql5 | NP_001099323.1 | DEXDc | 22..229 | CDD:214692 | 71/218 (33%) |
| DEAD | 31..201 | CDD:278688 | 67/182 (37%) | ||
| DEAH box | 157..160 | 2/2 (100%) | |||
| HELICc | 258..363 | CDD:238034 | 47/124 (38%) | ||
| RecQ_Zn_bind | 368..435 | CDD:292742 | 7/28 (25%) | ||
| Interaction with POLR2A. /evidence=ECO:0000250 | 491..621 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 518..538 | ||||
| RecQ5 | 626..816 | CDD:284397 | |||
| Interaction with RAD51. /evidence=ECO:0000250 | 653..726 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 679..795 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 822..884 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0514 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D445763at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 4 | 3.820 | |||||