DRSC/TRiP Functional Genomics Resources

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Protein Alignment RecQ4 and RecQ4

DIOPT Version :10

Sequence 1:NP_652607.1 Gene:RecQ4 / 53438 FlyBaseID:FBgn0040290 Length:1579 Species:Drosophila melanogaster
Sequence 2:XP_061519287.1 Gene:RecQ4 / 1276585 VectorBaseID:AGAMI1_001615 Length:1669 Species:Anopheles gambiae


Alignment Length:1732 Identity:776/1732 - (44%)
Similarity:1016/1732 - (58%) Gaps:219/1732 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DDSVFKLKYQKYKLRVKVWEKDFKKKNGRVPSKYDIRDASQEIRDSYKMYYKLKTSFLEETLNDV 66
            ||..|:.||||.|.|||.|||:|:||.||:|||.|||::..|||:|||:||:|||:.|:.||.|.
Mosquito     3 DDQAFRAKYQKCKYRVKQWEKEFRKKYGRIPSKLDIRESPSEIRNSYKLYYQLKTNLLKHTLLDA 67

  Fly    67 LSEDGYDILEMSQASDFGVSMLDQDVSLNEGPQLPLDISALVGPQSSGNLEEIPQSVEGSFSNLI 131
            |.:|          .||..|::.|:.|.::  .:..|:|.|:  .|||.:......:|.| |::.
Mosquito    68 LDDD----------DDFDGSLISQEASFSQ--DVSGDVSGLL--LSSGTILNDSALLERS-SSMS 117

  Fly   132 DLPNRQVLTNLVNRDENHVIRKFEAVEELPINQNAWGLNVSKK---PPAPPQPVEASKSAPGHGK 193
            .|..:.:.|  ....:.|    |||.:....|..||....|:|   |..|.:|:|..|..     
Mosquito   118 SLLTKPIAT--AQPSDTH----FEAEKLDQHNLVAWQGEKSRKAVQPTKPAEPIEPPKPV----- 171

  Fly   194 QPKAGASLKPSLSAKLFQSSRGFAKRNPRKPLSRCVSSSSSTTSLSSVPTDHHEELLDFETILIR 258
             ...|.:|.|..:|.:       .||||||.:||.....||..| |:..|.....|.|.||:|..
Mosquito   172 -TLKGITLLPKSTALI-------PKRNPRKSISRNSFGPSSQGS-STNGTAPKMVLPDLETLLTA 227

  Fly   259 KAQEYKEK----QQAIANNPMLASEHSKESIKTLVDDGWLRRNTKENTLDEEVPFAEANNNSGTS 319
            |::|.:..    ::.:...|::.::  .|.|..| |:.|:.| ....|.|..|...:|..:|...
Mosquito   228 KSKELESNATKVEEKLPAPPLVPTQ--SEPINQL-DERWINR-LSGGTGDSNVTTTDARPSSERP 288

  Fly   320 KKTNFGLANLDLSKLKPTV---------------------------------------------- 338
            ..|||||.|::::.|....                                              
Mosquito   289 TPTNFGLRNVNVASLASATSFGMSALSMTDKAGGTAVVSPQATAAAARIGVQNTAYDAAIHSDSD 353

  Fly   339 ------KEEKVLQAKPDQMAIIQELQTDMNSSMNQKPDHLNHTPPASSQKSVAPKNKPPPSEQET 397
                  ::|...:..|..:.|.::.:  :.:|:|:.|  :........:.|:...|..|...::.
Mosquito   354 GVVENSEDESATKTSPGMLHIAKKRK--IFTSINRSP--VERVEAKQPKPSIETNNVLPVESKDV 414

  Fly   398 DSDSDSVVAESEEE-------QEPQEYRQLSKRRKIVSTASGKVEVAAPVEIPNKVEPETE---- 451
            ::.....|||..|:       .:.:..:::||.:::   |...||.|..|.:|......|.    
Mosquito   415 ENQDPRGVAEEAEQGATPKGAPKKRVQKRVSKAKQV---AKKMVEKAKTVVVPRARSSRTNARKV 476

  Fly   452 -TFAQENP-----------DFSA-DEDQDATYV-----------------PENKKKDKAKRKQAA 486
             |: :|.|           :||| |||:|..|.                 ||:.::::.|.|.|.
Mosquito   477 ATY-KEVPLADGVQDEMEHEFSADDEDKDPDYKEQLERESRGLLPADGDDPESDQEEEPKPKSAP 540

  Fly   487 GKQ------KTTKPKAEP---KPKTEKKAKVKAEKKPKAEKKP-----RNSKKAIAVEPAPDPEE 537
            .|:      .|..|:.:|   |..|.:|:...:.|......||     |.:||....:...|.||
Mosquito   541 AKRVSRARSATGVPRKQPTKVKRSTTRKSTTVSPKLSPGSSKPTSQRGRKAKKITKRKMDVDGEE 605

  Fly   538 DERQPLNPEDLKYVLALEAGDITSVPRINVQDLEEADATAQRYI----RTFAAGPNPGLSEGSNI 598
            :|..|...:..:||.......:.|:||:::.:|......|..:|    .:.|.||:......:.:
Mosquito   606 EEAIPEAEQPQEYVPEFGLARLKSIPRLDINELVRDTKLADSFILGVAGSAAEGPSSNGKTRTTV 670

  Fly   599 RVDEKRAAARKKLEERIAAGKLNENFVTINIQKKKFVRGKKSVNFSKYKKQQWRHKKRVAALSGP 663
            ....|..|.|||:    ||||||||||.|:|:||.||:|||::|:|:|||.||:.|| .|||:||
Mosquito   671 AGSTKETALRKKM----AAGKLNENFVRIDIRKKVFVKGKKTINYSRYKKSQWKAKK-AAALTGP 730

  Fly   664 DMDMGGCDGGVLTCFQCGGVGHFAQQCKVK-GDSLLPLSAQLEEDPSPFPTLAEAQEMASQGAVV 727
            :|||.|||||.||||||||.||.|.|||.. .|.|||..|...|: |.||||.||:.||:...:.
Mosquito   731 EMDMRGCDGGTLTCFQCGGTGHMAFQCKKPLEDKLLPYDADTIEE-SSFPTLEEAEAMANSRTLA 794

  Fly   728 AHSRNISRLPQAANAAILQGDELNESEEDD---QESSGDEEVQQHPDPNWSSDEMDVDFEALDAA 789
            .||..|.|||..||..      ..|.|::|   :|..| |..::.|......|::|...|.....
Mosquito   795 VHSNRIERLPPVANPV------WKEQEQEDLPAEEQVG-EPGKEEPSTLPVEDDLDEPMEQESDE 852

  Fly   790 VEASLSQPVSQEKAASPIKTYVGHKIPEEFLKQAG-LDTTASSSNRSQHGGVKPLYDLLPDGSVQ 853
            ......|..:..:.|:|  .|:|||||||||||:| |:.|.|...:   |.|:|||....|.::.
Mosquito   853 HHQETEQSAAASQPAAP--AYIGHKIPEEFLKQSGLLEVTVSGGFK---GTVEPLYQQRGDCTLP 912

  Fly   854 DTTPEVLEALHMFGHTNFRKGQDRAIMRTLSGLSSLVTLSTGSGKSLCYQLPAYLYSRKVGAITL 918
            .|.|||.|||.||||.:||.||:||:||.|.|||:|||||||:|||||||||||||.:....|||
Mosquito   913 PTPPEVFEALRMFGHQSFRHGQERAVMRVLCGLSTLVTLSTGAGKSLCYQLPAYLYRKNRSCITL 977

  Fly   919 VISPLVSLMEDQVTGVPHFLRAHCLHTNQTAPQRMKIQQMIANGEIDILLVSPEAVVAGERATGF 983
            |||||||||||||.|:|.||.|||||||||...|.:..|.||.||:|:||:||||||:||::|||
Mosquito   978 VISPLVSLMEDQVHGMPDFLNAHCLHTNQTPKVRDRTMQAIAAGEVDVLLISPEAVVSGEKSTGF 1042

  Fly   984 GAILRQLPPIAFACIDEAHCVSQWSHNFRPSYLMICKVLRKNLGVRTVLGLTATATLPTRVSIIN 1048
            |::||||||||||||||||||||||||||||||||||||::.|||:|:||||||||:.||.||::
Mosquito  1043 GSLLRQLPPIAFACIDEAHCVSQWSHNFRPSYLMICKVLKEKLGVKTILGLTATATVQTRQSIVS 1107

  Fly  1049 HLGISDGERGIISDIPLPDNLVLSVSKDENRDAALLQLLNSERFEPCQSIIIYCTRRDECERIAG 1113
            ||.|.||.:||||||||||||:|:||:|.|||.||::||.||||...||||:||||||:|||:|.
Mosquito  1108 HLAIPDGVQGIISDIPLPDNLLLTVSRDANRDVALVELLQSERFSSLQSIIVYCTRRDDCERVAT 1172

  Fly  1114 FIRTCVQD-RREPTQDQTKKRKRVNWQAEPYHAGMPASRRRTVQKAFMSNELRIVVATIAFGMGI 1177
            |||||.|| .|........||||:|:.|||||||||||||||:|.||||.|||||||||||||||
Mosquito  1173 FIRTCFQDAARAAAAANAHKRKRLNYVAEPYHAGMPASRRRTIQNAFMSGELRIVVATIAFGMGI 1237

  Fly  1178 NKPDIRAVIHYNMPRNFESYVQEIGRAGRDGLPSHCHLFLDAKGGDQSELRRHVYSNSIDRHVIR 1242
            ||.||||:||||||:||||||||:||||||||.||||||||.||.|::||||.:|:|||||||||
Mosquito  1238 NKADIRAIIHYNMPKNFESYVQEVGRAGRDGLLSHCHLFLDGKGTDRNELRRFIYANSIDRHVIR 1302

  Fly  1243 KLLQKIFVPCSCDK-EASKRTALPIPLE----------------------------GDGPRVHMC 1278
            ||||||||||:|.| ..:|..||.:..|                            |.|.|..:|
Mosquito  1303 KLLQKIFVPCACAKILTNKDLALELREELKAVNGIDWDDDFEELSTADGRTQADGGGGGTRKRLC 1367

  Fly  1279 PGHEIGFSVEKTVEMLDIPAENISTLLCYMELDPRWCISVLSSAYVMAKVISYGGPKYLKHAAKE 1343
            |||||.||:|.||:.||||.|||:|.|||:|||.:..|..||.||.|.||:||||.:.|:.||||
Mosquito  1368 PGHEICFSIEATVQQLDIPEENITTFLCYLELDEQRYIQALSPAYTMCKVMSYGGVRPLRQAAKE 1432

  Fly  1344 CPPLAMAIALQIRDKTFKEDSNIIEFSVTDIAAGIGWNSGVVKYQLKDLEWVKVNGYPKRSPITV 1408
            |||||||.||.::.......|..|||.|.|:|:.|||:|||||||||:|||..||...||||::|
Mosquito  1433 CPPLAMAFALDLKRGISHATSTAIEFPVIDVASAIGWDSGVVKYQLKNLEWTTVNNVRKRSPLSV 1497

  Fly  1409 SFYDLGFRIKVPGDFTESEIDNALDTLYTRSVKQERTQLIQLQYVAHGLAAVAYSSCGQCCNADF 1473
            :|.:||||::.|||.|:.|:|:|||.||.|...||||||.||||::..|.:|.:::.|....||.
Mosquito  1498 TFTELGFRVRAPGDLTDEELDHALDGLYERVTHQERTQLAQLQYISDALNSVCFNTIGPVSRADC 1562

  Fly  1474 PQDRGEQLKAIVRNYFANDYPQD-LELEIEPSNVPDENIIDDVHALINMYPDNTFTGRNIARIFH 1537
            |....::||.|||.||..|..:: :|:..||.:..||.:|:|:...|..||:|.||||.|||:||
Mosquito  1563 PTGPSDKLKTIVREYFTTDISKEQIEIVPEPDDTTDEQLINDIRTAICRYPENNFTGRAIARLFH 1627

  Fly  1538 GIMSPNYPAVIWGRCKFWRAHVKVDFNRILHLANMAIIKRRT 1579
            |:.||||.|::|.|..||||:.|.|||||:.|||..|::.||
Mosquito  1628 GVQSPNYTALVWSRSNFWRAYTKTDFNRIVRLANAEIVRMRT 1669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RecQ4NP_652607.1 RecQL4_SLD2_NTD 9..55 CDD:412085 30/45 (67%)
RecQ 855..>1216 CDD:440280 271/361 (75%)
RecQ4XP_061519287.1 None

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