DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sulf1 and arsa

DIOPT Version :9

Sequence 1:NP_001262626.1 Gene:Sulf1 / 53437 FlyBaseID:FBgn0040271 Length:1114 Species:Drosophila melanogaster
Sequence 2:NP_001013561.2 Gene:arsa / 541416 ZFINID:ZDB-GENE-050320-118 Length:503 Species:Danio rerio


Alignment Length:576 Identity:129/576 - (22%)
Similarity:209/576 - (36%) Gaps:161/576 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PNIILILTDDQDV-ELGSL----NFMPRTLRLLRDGGAEFRHAYTTTPMCCPARSSLLTGMYVHN 113
            ||.:|:..||... :||..    :..|...||..: |..|...|.|:|:|.|:|::||||.|...
Zfish    24 PNFVLLFADDLGYGDLGCFGHPCSLTPNLDRLAAN-GLRFTDFYVTSPVCSPSRAALLTGRYQTR 87

  Fly   114 HMVFTNNDNCSSPQWQATHETRSYATYLSNAGYRTGYFGK-YLN-KYNGSYIPPGWREWGGLIMN 176
            ..::.......|......:|| :.|..|...||.|...|| :|. ..||:|:|            
Zfish    88 SGIYPGVLYPGSRGGLPLNET-TIAEVLKTQGYSTAIVGKWHLGVGLNGTYLP------------ 139

  Fly   177 SKYYNYSINLNGQKIKHGFD------YAKD---------YYPD---------------LIANDSI 211
                          .:||||      |:.|         :.||               |:.|:.|
Zfish   140 --------------TRHGFDSYLGIPYSHDQGPCQNLSCFPPDVKCFGLCDQGVVTVPLLFNEII 190

  Fly   212 A-----FLRSSKQQNQRKPVLLTMSFPAPHGPEDSAPQYSHLFFNVTTHHT--PSYDHAPNPDKQ 269
            .     ||:..|...:.....::.|.      :|:.|    .|....:|||  |.|..|....| 
Zfish   191 KQQPADFLQLEKAYGEFASQFISDSV------KDNRP----FFLYYPSHHTHYPQYAGADYAGK- 244

  Fly   270 WILRVTEPMQPVHKRFTNLLMTKRLQTLQSVDVAVERVYNELKELGELDNTYIVYTSDHGYHL-- 332
                  .|..|    |.:.||        ..|..|.::...|:|.|.::||.|.:|.|.|..|  
Zfish   245 ------SPRGP----FGDALM--------EFDGTVGKILQTLEETGVINNTLIFFTGDSGPELMR 291

  Fly   333 ----GQFGLIK-GKSFPFEFDVRVPFLIRGPGIQASKVVNEIVLNVDLAPTFLDMGGVPTPQ-HM 391
                |..||:| ||...:|..:|.|.:...||.....|...:..::|:.|||..:.|.|.|: .:
Zfish   292 KSRGGNAGLMKCGKGTTYEGGMREPAIAHWPGFIKPGVTRALASSLDILPTFAKLAGAPLPEVQL 356

  Fly   392 DGRSILPLLLSRNRAVRDN---WPDSFLIESSGRRETAEQIAESRARLQIERRNMKLANSSLLED 453
            ||..:..:|.:...:.|..   :|....::              .....:...|.|      ...
Zfish   357 DGVEMTDILFNLGPSKRQTMFYYPTDPSVK--------------YGVFAVRWENFK------AHY 401

  Fly   454 FLEGAGESTTIVSSSSTAATLMSSTAQQPEDGEEEVETDNEED-DVDGD--GAMDSSAAALEEDD 515
            :..||..|.   |:...:.:|::............:|||..|: ::|||  .|:.....|:::. 
Zfish   402 YTRGAAHSE---STPDNSCSLLAFLKYHDPPLLFNLETDPSENYNLDGDQWDAVRKQIQAVKQQ- 462

  Fly   516 LDDAAFEEGDEELDQEFQQNNDLPLAPYITKMMRLNSECSDPALLKNCLPGQKWKC 571
             .:|:...|:.::.:.            |..::       :|..:.||.|  |.:|
Zfish   463 -FEASMVFGESQISKG------------IDSLL-------EPCCIPNCRP--KPEC 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sulf1NP_001262626.1 AslA 51..>398 CDD:225661 101/395 (26%)
G6S 53..408 CDD:293766 102/405 (25%)
DUF3740 640..790 CDD:289325
ALP_like <940..989 CDD:304875
arsaNP_001013561.2 AslA 21..468 CDD:225661 121/525 (23%)
ARSA 23..500 CDD:293777 129/576 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592928
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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