DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sulf1 and Sgsh

DIOPT Version :9

Sequence 1:NP_001262626.1 Gene:Sulf1 / 53437 FlyBaseID:FBgn0040271 Length:1114 Species:Drosophila melanogaster
Sequence 2:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster


Alignment Length:625 Identity:139/625 - (22%)
Similarity:218/625 - (34%) Gaps:205/625 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NIILILTDDQDVELGS-LNFMPRT--LRLLRDGGAEFRHAYTTTPMCCPARSSLLTGMYVHNHMV 116
            |::|:|.||...|.|: ||...:|  |..|...|..|.:|:|:...|.|:||.||||        
  Fly    22 NVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSRSQLLTG-------- 78

  Fly   117 FTNNDNCSSPQWQATHETRSYATYLSNAGYRTGYFGKYLNKYNGSYIP------------PGWRE 169
                                      .||:.:|.:|.:...:|.:.:|            .|.|.
  Fly    79 --------------------------QAGHSSGMYGLHQGVHNFNVLPDTGSLPNLIRDQSGGRI 117

  Fly   170 WGGLI-------MNSKYYNY-------SINLNGQKIKHGFDYAKDYYPDLIANDSIAFLRSSKQQ 220
            ..|:|       .|:..:::       |||..|:.|....:||:.            ||:.:|  
  Fly   118 LSGIIGKKHVGAANNFRFDFEQTEEQHSINQIGRNITRMKEYARQ------------FLKQAK-- 168

  Fly   221 NQRKPVLLTMSFPAPHGPEDSAPQYSHLFFNVTTHHTPSYDHAPNPDKQWILRVTEPMQPVHKRF 285
            :::||..|.:.|..||......||:...     .....|.:........|        :|::..:
  Fly   169 DEKKPFFLMVGFHDPHRCGHITPQFGEF-----CERWGSGEEGMGSIPDW--------KPIYYDW 220

  Fly   286 TNL--------------LMTKRLQTLQSVDVAVERVYNELKELGELDNTYIVYTSDHGYHLGQFG 336
            .||              .:..:..|:..:|..|..:..||:..|..|.|.::||||:        
  Fly   221 RNLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSDN-------- 277

  Fly   337 LIKGKSFP------FEFDVRVPFLIRGPGIQ--ASKVVNEIVLNVDLAPTFLDMGGVPTPQ--HM 391
               |..||      :|..:|.|.:|..|..:  ..:....:|..:|:.|:.:|...:|.|.  .:
  Fly   278 ---GPPFPGGRTNLYEHGIRSPLIISSPNKEDRHHEATAAMVSLLDIYPSVMDALQIPRPNDTKI 339

  Fly   392 DGRSILPLLLSRNRAVRDNWP----DSFLIESSGRRETAEQIAESRARLQIERRNMKLANSSLLE 452
            .||||||:|       |:..|    ||..    |.....|.......|:...||...:.|.:...
  Fly   340 VGRSILPVL-------REEPPIKESDSVF----GSHSYHEVTMAYPMRMVRNRRYKLIHNINYWA 393

  Fly   453 DFLEGAGESTTIVSSSSTAATLMSSTA----------QQPEDGEEEVETDNEEDDVDGDGAMDSS 507
            ||.......|:........|||...|.          |:||....:::||               
  Fly   394 DFPIDQDFYTSPTFQQILNATLRKQTLPWYRSLLQYYQRPEWELYDIKTD--------------- 443

  Fly   508 AAALEEDDLDDAAFEEGDEELDQEFQQNNDLPLAPYITKMMRLNSECSDPALLKNCLPGQKWKC- 571
              .||..:|.|.|...|  .|.|..:|..|..:|   ||         ||           |:| 
  Fly   444 --PLERFNLADKAKYNG--TLKQLREQLFDWQVA---TK---------DP-----------WRCA 481

  Fly   572 ----VNEEGRWRKHK-CKFHLQLEHQLAAMPRK----QYQ 602
                :.|:|.::... |   |.|.|:....|::    ||:
  Fly   482 PHAVLQEQGVYKDQPVC---LTLGHEALQRPKRRILGQYE 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sulf1NP_001262626.1 AslA 51..>398 CDD:225661 88/395 (22%)
G6S 53..408 CDD:293766 91/405 (22%)
DUF3740 640..790 CDD:289325
ALP_like <940..989 CDD:304875
SgshNP_650760.1 AslA 17..476 CDD:225661 126/567 (22%)
SGSH 22..471 CDD:293751 123/550 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466512
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR43108
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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