DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sulf1 and Arsa

DIOPT Version :9

Sequence 1:NP_001262626.1 Gene:Sulf1 / 53437 FlyBaseID:FBgn0040271 Length:1114 Species:Drosophila melanogaster
Sequence 2:NP_001030105.2 Gene:Arsa / 315222 RGDID:1310381 Length:507 Species:Rattus norvegicus


Alignment Length:576 Identity:143/576 - (24%)
Similarity:209/576 - (36%) Gaps:169/576 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PNIILILTDDQDV-ELGSLNFMPRT---LRLLRDGGAEFRHAYTTTPMCCPARSSLLTG-MYVHN 113
            |||:||..||... :|||......|   |..|..||..|...|....:|.|:|::|||| :.|.:
  Rat    21 PNIMLIFADDLGYGDLGSYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLCTPSRAALLTGRLPVRS 85

  Fly   114 HM---VFTNNDNCSSPQWQATHETRSYATYLSNAGYRTGYFGKYLNKY--NGSYIPP--GWREWG 171
            .|   |...:.....|..:.|     .|..|:..||.||..||:....  .|:::||  |:..:.
  Rat    86 GMYPGVLGPSSQGGLPLEEVT-----LAEVLAARGYLTGMAGKWHLGVGPEGAFLPPHQGFHRFL 145

  Fly   172 GL--------IMNSKYYNYSINLNGQKIKHGFDYAKDYYPDLIANDSIAFLRSSKQQNQRKPVLL 228
            |:        ..|...:...|..:|     |.|......| |:||                   |
  Rat   146 GIPYSHDQGPCQNLTCFPPDITCSG-----GCDQGLVPIP-LLAN-------------------L 185

  Fly   229 TMSFPAPHGP--------------EDSAPQYSHLFFNVTTHHTPSYDHAPNPDKQWILRVTEPMQ 279
            |:....|..|              .|:..|....|....:|||    |.|               
  Rat   186 TVEAQPPWLPGLEARYVSFSRDLMADAQRQGRPFFLYYASHHT----HYP--------------- 231

  Fly   280 PVHKRFTNLLMTKRL------QTLQSVDVAVERVYNELKELGELDNTYIVYTSDHGYHL------ 332
                :|:....|||.      .:|..:|.||..:...:.:||.|..|.:::|:|:|..|      
  Rat   232 ----QFSGQSFTKRSGRGPFGDSLMELDGAVGALMTAVGDLGLLGETLVIFTADNGPELMRMSDG 292

  Fly   333 GQFGLIK-GKSFPFEFDVRVPFLIRGPGIQASKVVNEIVLNVDLAPTFLDMGGVPTPQ-HMDGRS 395
            |..||:: ||...||..||.|.|:..||.....|.:|:..::||.||...:.|.|.|. .:||..
  Rat   293 GCSGLLRCGKGTTFEGGVREPALVYWPGHITPGVTHELASSLDLLPTLAALTGAPLPNITLDGVD 357

  Fly   396 ILPLLLSRNRAVRDN------WPDS----FLIESSGRRETAEQIAESRARLQIERRNMKLANSSL 450
            |.||||...::.|::      :||.    |.:                       ||.|..    
  Rat   358 ISPLLLGTGKSPRNSVFFYPPFPDEIHGVFAV-----------------------RNGKYK---- 395

  Fly   451 LEDFLEGAGESTTIVSSSSTAATLMSSTAQQPEDGEEEVETDNEEDDVDGDGAMDSSAAALEEDD 515
            ...|.:|:..|.|....:..||..:  ||.:|     .:..|..:|..:....:||:        
  Rat   396 AHFFTQGSAHSDTTPDPACHAANRL--TAHEP-----PLLYDLSKDPGENYNLLDST-------- 445

  Fly   516 LDDAAFEEGDEELDQEFQQ---NNDLPLAPYITKMMRLNSECS---DPALLKNCLP 565
                      ||:..|..|   :.:|..|.|...|....|:.:   ||||...|.|
  Rat   446 ----------EEVSPEALQALKHIELLKAEYDAAMTFSPSQIAKGEDPALQICCQP 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sulf1NP_001262626.1 AslA 51..>398 CDD:225661 104/391 (27%)
G6S 53..408 CDD:293766 108/401 (27%)
DUF3740 640..790 CDD:289325
ALP_like <940..989 CDD:304875
ArsaNP_001030105.2 AslA 17..470 CDD:225661 135/553 (24%)
ALP_like 20..503 CDD:304875 143/576 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351152
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.