DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sulf1 and arsh

DIOPT Version :9

Sequence 1:NP_001262626.1 Gene:Sulf1 / 53437 FlyBaseID:FBgn0040271 Length:1114 Species:Drosophila melanogaster
Sequence 2:XP_003199313.1 Gene:arsh / 100332997 ZFINID:ZDB-GENE-081104-120 Length:583 Species:Danio rerio


Alignment Length:514 Identity:106/514 - (20%)
Similarity:170/514 - (33%) Gaps:197/514 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMRHSSLRLIIGGLILLLFVLNVFSKEQGSHSHKRSHSAKRFSRDSNSARERRPNIILILTDDQD 65
            ||...|||.:...|:.|.|.......:|.|                      |||.:|::.||..
Zfish     3 MMDSRSLRSVSALLLFLQFCWCFSDGDQKS----------------------RPNFVLMMVDDLG 45

  Fly    66 V-ELGSL-NFMPRTLRL--LRDGGAEFRHAYTTTPMCCPARSSLLTGMYVHNH----------MV 116
            : ::|.. |...||..:  |...|.:..|..:..|:|.|:|::.:||.|....          ::
Zfish    46 IGDIGCYGNTTIRTPNIDRLASDGVKLTHHLSAAPLCTPSRTAFMTGRYPLRAGMGSTGRVQVIL 110

  Fly   117 FTNNDNCSSPQWQATHETRSYATYLSNAGYRTGYFGKY--------------------------- 154
            |........|     :|| ::|..|...||.||..||:                           
Zfish   111 FLAGSGGLPP-----NET-TFAKLLQKQGYTTGIVGKWHLGVNCESRSDLCHHPNNHGFDFFYGL 169

  Fly   155 ------------------------LNK-------------YNGS-YIPPGWR------------- 168
                                    ||.             ..|| .:..|||             
Zfish   170 PFTLFVDCAVGAGSGVLLDYQEMLLNSCKLLLVCVLTLLALRGSGLLCAGWRLLFHLSAAALICF 234

  Fly   169 -EW---GGLIMNSKYYNYSINLNGQKIKHGFDYAKDYYPDLIANDSIAFLRSSKQQNQRK---PV 226
             .|   .||:   :.:|..:..||:.::.         |..:...:...:|.::|..:|.   |.
Zfish   235 LLWFVPFGLL---RVWNCILMRNGEVVEQ---------PMNLQTLNSRLMREAEQFMERHRDGPF 287

  Fly   227 LLTMSFPAPHGP----EDSAPQYSHLFFNVTTHHTPSYDHAPNPDKQWILRVTEPMQPVHKRFTN 287
            ||.:|||..|.|    |..|.:..|..:.                                    
Zfish   288 LLFVSFPQVHTPMLVTEGFAGKSRHGLYG------------------------------------ 316

  Fly   288 LLMTKRLQTLQSVDVAVERVYNELKELGELDNTYIVYTSDHGYHL------GQFGLIKGKSFPFE 346
                   ..::.||..|.||.:.:..||..:.|.:.:|||||..:      |..|:.:|......
Zfish   317 -------DNVEEVDWMVGRVVDTIDRLGLTEKTLLYFTSDHGGGIEEGPRGGWNGIYRGGKAMGG 374

  Fly   347 FD--VRVPFLIRGPG-IQASKVVNEIVLNVDLAPTFLDMGG--VPTPQHMDGRSILPLL 400
            :|  :|||.:.|.|| :.|.:.|.|....:|:.||.:.:.|  :|..:.:||..::|||
Zfish   375 WDGGIRVPGIFRWPGRLAAGREVAEPTSLMDVFPTVVKLAGGELPKDRLLDGHDLMPLL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sulf1NP_001262626.1 AslA 51..>398 CDD:225661 93/460 (20%)
G6S 53..408 CDD:293766 96/462 (21%)
DUF3740 640..790 CDD:289325
ALP_like <940..989 CDD:304875
arshXP_003199313.1 AslA 31..453 CDD:225661 97/486 (20%)
ALP_like 33..553 CDD:304875 96/462 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.