DRSC/TRiP Functional Genomics Resources

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Protein Alignment c11.1 and Mro

DIOPT Version :9

Sequence 1:NP_001285050.1 Gene:c11.1 / 53436 FlyBaseID:FBgn0040236 Length:1742 Species:Drosophila melanogaster
Sequence 2:XP_038953192.1 Gene:Mro / 361348 RGDID:1559803 Length:441 Species:Rattus norvegicus


Alignment Length:468 Identity:95/468 - (20%)
Similarity:171/468 - (36%) Gaps:116/468 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1231 YWHLVCNDPELTGLTLDNFLQL--LSGASLQEGGQDASLSER-QKLASGQPFAIFCALHEMLPCK 1292
            |||.....|....|.....|::  |||.|:||.|.:..:..| .|..:|...|::.|..:.|..:
  Rat    27 YWHHGEMTPGSACLGKGEVLRIVVLSGESVQESGLEELVRGRNSKQQAGDTSAVWSAKAQHLGRR 91

  Fly  1293 --DIKGQLETRF---------AD---MFCM-------------LLTSLSSYTNLAAPNPINNASL 1330
              ::.|.:..:|         ||   :.|:             ||.||                .
  Rat    92 KDNLVGVIGGQFPPPPHHLVLADPLSLICLAFLCSAGSKFREDLLASL----------------F 140

  Fly  1331 SPNQTQSGKTKFGF-----VPNKELIKLNPCQIALETFQAFLTNLEMEQIASVLTVNTQLASSAD 1390
            ...:|::||.....     :||:                  ..|...|:        .:.|||.:
  Rat   141 VGKETRAGKISLTHHIWRPIPNR------------------WNNAPPER--------PRTASSPE 179

  Fly  1391 WHNYIELLTPMAIGLGQQLQLGSPQMRQLVNSLSKYVASPYDGQRVAAVGIFSRL---------V 1446
            .......:||.|..:        .||:::.|......||....:|......||::         .
  Rat   180 TAVLHVTVTPGASFM--------EQMQRIPNQPLPTPASQSKKRRTPLSSFFSKVSWKLRLQKRE 236

  Fly  1447 PLKPTGELAASILLHLGAALSDPNAVVRGLSIQGMGYVG-QLGEKEAKRYSETAIGALLKGVDDP 1510
            |||       ::...|......||...|.|:::|:|.:. :..:|:.::|.:..:..|:.|:.||
  Rat   237 PLK-------NLFFVLAERARGPNPRKRHLAMRGLGILAHEAPDKQVRKYKKVMLDLLVHGLYDP 294

  Fly  1511 VGDCLINIPLESMRGLSGILRALPSERVEPFHVSLAIRIRPFLGNYALEMREAAIQLFGDICEGK 1575
            |...:|:   ||::.|:.:|..:..:|:..|.:.:.::.|..|.:....:|.:|..|||.:....
  Rat   295 VSSEVIH---ESVKTLTIMLGKIQGQRLGSFFIDITLQTRTLLDDEDDSVRYSAFVLFGQLAAFA 356

  Fly  1576 HDDGSSSPTSSMEALREQLIANLFPLLLHLSESEVAIASACRGTLQRVCRLLTAPR---VVEMAE 1637
            ........|..:...::.|::       ||.:....:|.||...:| .|.....||   ..:..|
  Rat   357 GRKWKKFFTHQVNQTQDSLLS-------HLQDESPQVAKACTMAVQ-ACVPYLKPRKEQSFQSEE 413

  Fly  1638 QQLGEERGHQLNY 1650
            .|.......||::
  Rat   414 DQKNRRLSQQLSH 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c11.1NP_001285050.1 None
MroXP_038953192.1 HEAT repeat 241..269 CDD:293787 7/27 (26%)
HEAT repeat 283..316 CDD:293787 10/35 (29%)
HEAT repeat 326..355 CDD:293787 7/28 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31329at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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