DRSC/TRiP Functional Genomics Resources

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Protein Alignment c11.1 and Mroh6

DIOPT Version :9

Sequence 1:NP_001285050.1 Gene:c11.1 / 53436 FlyBaseID:FBgn0040236 Length:1742 Species:Drosophila melanogaster
Sequence 2:XP_002729882.1 Gene:Mroh6 / 100359562 RGDID:2323632 Length:720 Species:Rattus norvegicus


Alignment Length:675 Identity:153/675 - (22%)
Similarity:247/675 - (36%) Gaps:158/675 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1109 DEPKQIYNLAGDIAKIIALRISSFQYLQFCKTLLHSLRDPEQSSTIGASVVLKFFIQQKGSELFH 1173
            :.|.|:...:.:...:..|.:    |...|      |.:...:.|...::.|...::.:|..|..
  Rat    92 ERPYQVSQYSWEEGTLADLAL----YTAAC------LEEAGYAGTQATALTLSSALEARGQRLED 146

  Fly  1174 AIPDLVRDSLLALRVCEVP-----RAKSGVLKALVALTKHHPKLVCAEMLSQPLPYDPNLVEYWH 1233
            .:.|||| .|||    :||     |.:...|:.|.||...|.:.|...:|...||.|....|.|.
  Rat   147 QVHDLVR-GLLA----QVPSLAEGRPRRAALRVLSALALEHAQDVVCALLPSSLPPDRAASELWR 206

  Fly  1234 LVCNDPELTGLTLDNFLQLLSGASLQEGGQDASLSERQKLASGQPFAIFCALHEMLPCKDIKGQL 1298
            .:..:..:.|..|...|..|.||:   |.:..:|:..:            ||.|||......|..
  Rat   207 SLSRNQRVNGQVLVQLLWALKGAA---GPESEALAATR------------ALGEMLAVSGCVGAT 256

  Fly  1299 ETRFADMFCMLLTSLSSYTNLAAPNPINNASLSPNQTQSGKTKFGFVPNKELIKLNPCQIALETF 1363
            ...:..:...|:|.|         :.:...:.||:..:..:......|:..      ....:|..
  Rat   257 RGFYPHLLLALVTQL---------HDLAQGAHSPDSPKVWEPSHRGPPHSH------ASCTVEAL 306

  Fly  1364 QAFLTN-------LEMEQ-------------IASVLTVNTQLASSADWH---NYIELLTPMAIGL 1405
            :|.||.       ..|||             :..||.:.:.:.:.||.|   .:.:||       
  Rat   307 KALLTGDGGRMVVTCMEQAGGWRRLVGAHTHLEGVLLLASAMVAHADHHLRGLFADLL------- 364

  Fly  1406 GQQLQLGSPQMRQLVNSLSKYVASPYDGQRVAAVGIFSRLVPLKPTGELAAS--ILLHLGAALSD 1468
                    |::|...||           ||:.|:..|:.|:..:||.:|...  ||..|.....|
  Rat   365 --------PRLRSANNS-----------QRLTAMAFFTGLLQSQPTAQLLREEVILERLRTWQGD 410

  Fly  1469 PNAVVRGLSIQGMGYVGQLGEKEAKRYSETAIGALLKGVDDPVGDC-LINIPLESMRGL----SG 1528
            |...||.|.:.|:|::..  .:...|:..|.:..||:.:.:  ||. |:...|.::|.:    ..
  Rat   411 PEPTVRWLGLLGLGHLAM--NRGKIRHVNTLLPVLLRALGE--GDVRLVGAALGALRRILLQPGA 471

  Fly  1529 ILRALPSERVEPFHVSLAIRIRPFLGNYALEMREAAIQLFGDICEGKHDD---GSSSPTSSMEAL 1590
            .:|.|.||        |..|:.|.|.:....:|.:|:.|.|.:.......   |...|      |
  Rat   472 PVRLLSSE--------LRPRLPPLLDDARDSVRASAVGLLGTLVRRGQRGLRLGLRGP------L 522

  Fly  1591 REQLIANLFPLLLHLSESEVAIASACRGTLQRVCRLLTAPRVVEMAEQQLGEERGHQLNYSSFVL 1655
            |:.::.:|.||||.|.:|....|.:...||.|..|.|         ...|.||.....:|.|  .
  Rat   523 RKLVLQSLVPLLLRLHDSSQDAAESSEWTLVRCDRAL---------RWGLLEEMVTVAHYDS--P 576

  Fly  1656 EFVKTIALELT----DHIQDFIDSCLPQLRSQWPEVRGSAAIVIGILHNFLSERNVQTETVASKI 1716
            |.:..:...|.    .|:|.|:......|||....:|.:|.::||.|....|.:.|..:.:.|  
  Rat   577 EALSRVCHRLVHRYPSHVQHFLSQTQGYLRSPQDTLRRAATVLIGFLAYHTSPKGVSQDLLDS-- 639

  Fly  1717 AVLLKDEQALVRMRAATALGYFFGD 1741
              |.:|            ||...||
  Rat   640 --LFQD------------LGQLQGD 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c11.1NP_001285050.1 None
Mroh6XP_002729882.1 HEAT repeat 363..387 CDD:293787 11/49 (22%)
HEAT repeat 397..430 CDD:293787 10/34 (29%)
HEAT repeat 438..466 CDD:293787 8/29 (28%)
ARM 439..552 CDD:237987 31/128 (24%)
HEAT repeat 477..506 CDD:293787 10/36 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23120
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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