DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment c12.1 and CWC15

DIOPT Version :9

Sequence 1:NP_652605.1 Gene:c12.1 / 53435 FlyBaseID:FBgn0040235 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_010447.3 Gene:CWC15 / 851741 SGDID:S000002570 Length:175 Species:Saccharomyces cerevisiae


Alignment Length:277 Identity:56/277 - (20%)
Similarity:90/277 - (32%) Gaps:120/277 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTAARPTFDPARGGSGRGEKDLSALSKQYS------SRDLPGHTKLKYRETGQGTSDENRNRDF 59
            |||:.||..: ||.|         |.:..|:      :|.|||||.||||:             |
Yeast     1 MTTSHRPQLE-ARSG---------AKAAAYTPTGIEHARLLPGHTTLKYRK-------------F 42

  Fly    60 RKELEEREREARSGTGATSSSSGKALPSIVRKAIEANNAGGGSSAAKRSKPDAGQQQAQQAAQQQ 124
            ::     |...|:.......|:.|:|...|....:.:..|.|:....||:.|             
Yeast    43 KE-----EENLRANCAQEDRSNDKSLEEAVMNEEKQDVVGSGNLQETRSEKD------------- 89

  Fly   125 AANMDADEPLDNDSSDSDSDSDDDDAALLAELQKIKQERLQETARRESEKKQEDERIRMENILSG 189
                                            ||...:.|..|.:.:.|.|.|         |.|
Yeast    90 --------------------------------QKDSLQELLVTQKNKVEDKAE---------LEG 113

  Fly   190 NPLMNYEPGTAASAAGRASGLGGDLKIKRRWDDDVVFKNCARSAPDKKTH------------FVN 242
            |..:.                ||: ..:|.|.....|   .|....|:|:            ::|
Yeast   114 NEQLK----------------GGN-SSRRSWRKGTAF---GRHKVTKETNIKEHATKKSASGYIN 158

  Fly   243 DALRSDFHKKFMDKYIK 259
            |..:|::|::|:.|:::
Yeast   159 DMTKSEYHQEFLHKHVR 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c12.1NP_652605.1 Cwf_Cwc_15 1..258 CDD:282713 56/274 (20%)
CWC15NP_010447.3 Cwf_Cwc_15 1..>123 CDD:398517 44/220 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102825
Panther 1 1.100 - - LDO PTHR12718
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

Return to query results.
Submit another query.