DRSC/TRiP Functional Genomics Resources

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Protein Alignment c12.2 and CG13185

DIOPT Version :9

Sequence 1:NP_001259381.1 Gene:c12.2 / 53434 FlyBaseID:FBgn0040234 Length:1403 Species:Drosophila melanogaster
Sequence 2:NP_001097279.2 Gene:CG13185 / 36268 FlyBaseID:FBgn0033661 Length:5526 Species:Drosophila melanogaster


Alignment Length:1429 Identity:275/1429 - (19%)
Similarity:488/1429 - (34%) Gaps:439/1429 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EEDSLTIGDVSVRLRKPKDPQLVPQQYADTSRIKETTDLKRRNELKYASDGTLQLSQSALHHLR- 101
            ||..|.:   |.::|..::.:|:.:..  .:..::..||:...:::...:.:..:|:..|..:| 
  Fly  1366 EEGYLVL---SSKVRSQEEHELIEKTL--FANFRKKLDLQTLFDIQTDRESSSMVSRKILDAIRN 1425

  Fly   102 --------W--------MLQKDALRQD--MFLLGQPGPLRRQLAMQFLELTQREVEYVALSRDTT 148
                    |        ::...||..|  :.|:|..|..:..:......:...::..:.....|.
  Fly  1426 FKLRDDIVWTRNMTRMAVVTAKALEFDEPVLLVGPTGCGKTTVCQLLASIADVQLRILNCHMHTE 1490

  Fly   149 ESDL---------KQRREINDRAAIFHDQGAVRAALNGRVLVLDGVEHAERNVLPILNNLLENRE 204
            .:|.         |:..::.:.|    |...:.|...|...:.|.:..||.:||..||.:||   
  Fly  1491 GADFLGGLRPCRGKESTQLFEWA----DGPLIYAMQEGSYFMADEISLAEDSVLERLNCILE--- 1548

  Fly   205 MHLESGKFLMSPERYDKLLEKHSREQLDEWG--LLRVSEQFRVVALGLPTHKYKGTPLDPPLRSR 267
                       |||...|.||....:||...  :::....|:.:|...|...:....|.|.||:|
  Fly  1549 -----------PERTVLLAEKGGISELDASPDFVVQAKSGFQFLATMNPGGDFGKKELSPALRNR 1602

  Fly   268 F---------QSRNVTTYSYGELYEELQQEAPSVPGEQLKQLLTFALTLQQADPVLQLPD----- 318
            |         ...::...:|..:..:.:.|..::...::.:.|        .|.||.:.|     
  Fly  1603 FTEVWCLPSDNKEDLIEIAYNCMRRQKEHENQAINTHKVAEYL--------VDVVLHIRDTNDKF 1659

  Fly   319 -FPIHNLALGVKMLAANPSLSLHDVISRIYPYQT-------MLKPDQKKRVEELLKKLDIQLVPS 375
             |.:.::......:.:|..||..:  ..|:..:|       ||..:.:::||.|...:..|.:..
  Fly  1660 KFSVRDILAWANYMVSNAKLSFAE--QAIFGLETIFLDALEMLPHESQEQVELLKSNIVKQAIKQ 1722

  Fly   376 PSI----KKIEAQSQENSLIHIKLDELQ-------LNLPEGQIPTASTYFV-DLPHQRQALASLL 428
            .|:    |....:..|.....::|:|.:       :::.:.::.:|...|: |.|..:|.|..||
  Fly  1723 ASLILQEKFTLEELSEKRGTEVELNECRFGIRPFFIDVNQERLTSAKEDFLFDAPTTKQNLFRLL 1787

  Fly   429 QAYAV-GDVCLVGEKGVGKLTLTQEL----------LRLLQQTSEPMMLYEDMTSRD-------- 474
            .|.:: ..|.|.|..||||.::.:.:          :.|.:.|....:...|:.:.|        
  Fly  1788 SALSLQKPVLLEGPPGVGKTSIVESIGSAIGYQIVRINLCEHTDLADLFGTDLPAEDNLLESNTA 1852

  Fly   475 IVQQRITSPQGDTVWRDSPLVRAAKSGSVAVLNGLHRLHKSTASVLQRLIHDRELQLCDGTTLLG 539
            ..:::|.|    .||||.||:.|.|:             |:|..:|.      ||.|...:.|.|
  Fly  1853 ATERQIRS----FVWRDGPLLAALKA-------------KNTWILLD------ELNLAPQSVLEG 1894

  Fly   540 ANRYQALLQQGFSKEELGKLGFLPIHESF------RVVALAEPPRLGGGQ----PSWL------- 587
            .|   |:|      :..|::....:::||      |:.|...|.:.|||:    .|:|       
  Fly  1895 LN---AVL------DHRGEVYIPELNKSFHLAGSTRIFACQNPLKQGGGRKGLPQSFLNRFTKVY 1950

  Fly   588 -----TPELL----------------------------SLF-LYQELRPLRQSEEAELLAQLC-- 616
                 |.:||                            :|| :|.......:|:..:|.|:|.  
  Fly  1951 LRKLSTEDLLHVVTEKYGKYFDQLNAYFLELLDQKAEGNLFEIYSGKESSCKSDSFDLGARLVRF 2015

  Fly   617 ----------------GGDLPAGMDQLLKLAQLLRSSQDPLLQGLAG------------TLSTRQ 653
                            ||.....:..:|:...||.:.|...:.|.:.            ||..|.
  Fly  2016 SEQLDRGVASMEFGYKGGPYEFNLRDILRWCDLLHNPQTGYILGASPSSFQAAFKDFLLTLYERM 2080

  Fly   654 LLKLARRLAAYPESELSDVHEMLQNTFL--ARFMPALSRG-ALEQAIQQVGIKPREIKLKSKKNQ 715
            .|...:|:..  :.:.|.:..:....||  |.::..:|.. ||.....:|.:  .::.|..|:..
  Fly  2081 QLVYYQRMRC--DQDKSYIRNVFSTVFLCDAEYLNQVSNDVALYWTADKVYL--NDVVLSRKQAD 2141

  Fly   716 I-----AVEDNSLRIGSTRWPLGNPTQAQLSKVPHTLFYEMPQHVQLLERLLQDYLIGEHLLLVG 775
            :     ..|.:.|.:.|.|        .||.::..|:..|.|                  |||.|
  Fly  2142 VLDLVNRQEQSPLLLDSQR--------QQLKQIIETVHMEKP------------------LLLCG 2180

  Fly   776 NQGVGKNKLVDRLLELMQR-------------PREYIQLHR---------DTTVHSLTLQATLKD 818
            :...||.||:|.|..|..|             ..:.|.|:|         :|.|.|...:|.   
  Fly  2181 STDSGKTKLIDALCVLSNRLCNTDIIDDSVTGSFQQIDLNRHLEIIYKKVETLVFSCVQRAF--- 2242

  Fly   819 GQVSYEDSALVQAVRTGHVL------VVDEADKAPVNVTCILRTLVESGEMVLADGRRIVPPGEG 877
              |.:..|..|:.:.....:      |..||.:..|           ..|:.|...|.    |..
  Fly  2243 --VLHTQSEFVEQLWNNWSMYNKLAKVTTEAQQHSV-----------LDELKLFSERL----GSL 2290

  Fly   878 GRVPNSIETHPDFRLIVLANRPGFPFLGNDFFAALGDVFSCHAISNPDPESEIFLLQQYGPKVPI 942
            |::...:|..|.                |....||..:        .:.:|::.|||.|     |
  Fly  2291 GKIIEVLEATPQ----------------NCQVRALQQL--------AEIKSQLLLLQTY-----I 2326

  Fly   943 KTLRTLVNAFGELRTLADEGMLNYPYSTREVVSIVKHLERYPEENMSEVVGNVLDFDRYQPEALQ 1007
            ||..:| |..|           ::.:...::|:.:|..:....|:::.....||  ||..|    
  Fly  2327 KTADSL-NTGG-----------SFEWVDSQIVTSLKCGQYILLEHVNLCSSAVL--DRLNP---- 2373

  Fly  1008 QVTQVLAKHGIESYAEEEIQAIRKQRILQASVNRHSGLGVSGPKFGKLDPKNEPHVGGNTWAGGS 1072
                |...:|....||:.|.|.....::..|.|..:.|.|. ||.|:|.     ....|.....|
  Fly  2374 ----VFEPNGSLLIAEKGISAQDSAEVVYKSTNFRAFLTVD-PKNGELS-----RAMRNRCVELS 2428

  Fly  1073 GGRDTAGLGGKGGPFRLDKGHKVHQLSDEEKADVPEEIKRAAREMNRKAFEDKLKEIKMSAHDHK 1137
            ..|||..:                   |:.:|.|.|:   ..|||         :.|......||
  Fly  2429 LSRDTYSV-------------------DDLRAFVHEQ---GVREM---------EAIDCILRVHK 2462

  Fly  1138 LYAQFSEPNRKQVQQLK--AVLEAMQTKSKERQWQKYQTHGDLDDTRLVEGITGEKNIYRRRAEA 1200
            ..:|.:|.|...:..|.  |.|.|...:.                     |...::.||....|.
  Fly  2463 GLSQLTEFNNYSISHLTQFAFLSAAYRRI---------------------GYELKRAIYVAAMEV 2506

  Fly  1201 NPWADHVQEKPNRLKLVVDVSGSMYRFNGYDGRLDRQLEAVVMVMEAFEGFEKKIVYDIIGHSG 1264
            ..::.:           .|:.|  |..:.|..:|...:.|...|.|.....::..:.|:|.:||
  Fly  2507 YVYSAN-----------TDLMG--YGLSYYQNKLREVVLAQTEVFEEVAVIQEDFLSDVILNSG 2557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c12.2NP_001259381.1 AAA_5 112..268 CDD:285029 35/168 (21%)
AAA_5 435..595 CDD:285029 46/227 (20%)
AAA_5 770..916 CDD:285029 36/173 (21%)
vWA_F11C1-5a_type 1212..1403 CDD:238732 12/53 (23%)
CG13185NP_001097279.2 MDN1 298..5521 CDD:227596 275/1429 (19%)
P-loop_NTPase 315..505 CDD:304359
P-loop_NTPase <887..972 CDD:304359
P-loop_NTPase 1147..1283 CDD:304359
P-loop_NTPase 1454..1603 CDD:304359 34/166 (20%)
P-loop_NTPase 1795..1946 CDD:304359 43/182 (24%)
P-loop_NTPase <2335..>2378 CDD:304359 10/63 (16%)
Prothymosin 4843..4920 CDD:281265
PHA03151 4856..5060 CDD:177546
MttA_Hcf106 <5046..5166 CDD:294511
vWA_midasin 5261..5526 CDD:238737
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5271
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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