DRSC/TRiP Functional Genomics Resources

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Protein Alignment c12.2 and SMTNL1

DIOPT Version :9

Sequence 1:NP_001259381.1 Gene:c12.2 / 53434 FlyBaseID:FBgn0040234 Length:1403 Species:Drosophila melanogaster
Sequence 2:NP_001099035.2 Gene:SMTNL1 / 219537 HGNCID:32394 Length:494 Species:Homo sapiens


Alignment Length:177 Identity:40/177 - (22%)
Similarity:60/177 - (33%) Gaps:49/177 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   981 ERYPEENMSEVVGNVLDFDRYQPEALQQVTQVLAKHGIE------------------SYAEEEIQ 1027
            |....|:...||.:....:..:|:..::     ||||.:                  |.:||:.|
Human   196 EEAKAESQKAVVEDEAKAEPKEPDGKEE-----AKHGAKEEADAKEEAEDAEEAEPGSPSEEQEQ 255

  Fly  1028 AIRKQRILQASVNRHSGLGV--SGPKFGKLDPKNEPH------VGGNTWAGGSGGRDTAGLGGKG 1084
            .:.|:        ...|.||  |.|:.....|..|.|      :|.:..|.|    .|:....:.
Human   256 DVEKE--------PEGGAGVIPSSPEEWPESPTGEGHNLSTDGLGPDCVASG----QTSPSASES 308

  Fly  1085 GPFRLDKGHKVHQLSDEEKADVPEE------IKRAAREMNRKAFEDK 1125
            .|..:.:.......|.|:|...||.      ..|..|..||||..||
Human   309 SPSDVPQSPPESPSSGEKKEKAPERRVSAPARPRGPRAQNRKAIVDK 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c12.2NP_001259381.1 AAA_5 112..268 CDD:285029
AAA_5 435..595 CDD:285029
AAA_5 770..916 CDD:285029
vWA_F11C1-5a_type 1212..1403 CDD:238732
SMTNL1NP_001099035.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..348 34/168 (20%)
2A1904 <19..278 CDD:273344 19/94 (20%)
CH 380..481 CDD:366016
Calmodulin-binding. /evidence=ECO:0000250 476..494
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5271
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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