DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment c12.2 and F55F10.1

DIOPT Version :9

Sequence 1:NP_001259381.1 Gene:c12.2 / 53434 FlyBaseID:FBgn0040234 Length:1403 Species:Drosophila melanogaster
Sequence 2:NP_001368166.1 Gene:F55F10.1 / 186322 WormBaseID:WBGene00018898 Length:4362 Species:Caenorhabditis elegans


Alignment Length:1467 Identity:291/1467 - (19%)
Similarity:488/1467 - (33%) Gaps:470/1467 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 IFHDQGAVRAALNGRVLVLDGVEHAERNVLPILNNLL-ENREMHLESGKFLMSPERYDKLLEKHS 227
            :|.:...|:|..:|..::||.:..|..:|:..||.|| :|||        |..|| .::.::.|.
 Worm   800 VFREGALVQAVRDGSWVILDELNLAPTDVIEALNRLLDDNRE--------LFVPE-INETIKAHP 855

  Fly   228 REQLDEWGLLRVSEQFRVVALGLPTHKYKGTP-LDPPLRSRFQSRNVTTYSYGELYEELQQEAPS 291
            |              ||:.|...|...|.|.. |...|.|||...........||.|.:......
 Worm   856 R--------------FRLFATQNPAGSYAGRKRLSRALMSRFIVLRFHHLPIEELSEMVCARCGV 906

  Fly   292 VPGEQLKQ----------------------LLTF---------ALTLQQADPVLQLPDFPIHNLA 325
            .|...||.                      |:|.         ..|.:..|..||:  ...|   
 Worm   907 PPNASLKMIEVLNELRNRRSLSGLFSARDGLMTLRDVFRWAKRMTTDETTDDWLQI--LVNH--- 966

  Fly   326 LGVKMLAANPSLSLHDVISRIYPYQTMLKPDQKKRVEELLKKLDIQLVPSPSIKKIEAQSQENSL 390
             |..:||........||.    ..:|:.|..::|..:|.|..||...:|...|            
 Worm   967 -GYFLLAGRCRNEKDDVT----VVETLEKVIKRKIDKEALFSLDSPYMPRDVI------------ 1014

  Fly   391 IHIKLDELQLNLPEGQIPTASTYFVDLPHQRQALASLLQAYAVGD-VCLVGEKGVGKLTLTQEL- 453
                .:::.|.|                ..|:.|....||:...: |.:|||.|.||.||::.: 
 Worm  1015 ----TEKVVLTL----------------GMRRMLVLTEQAWLRNEAVLMVGETGGGKTTLSEVVG 1059

  Fly   454 ---LRLLQQTSEPMMLYEDMTSRDIVQQRITSPQGDTVWRDSPLVRAAKSGSVAVLNGLHRLHKS 515
               ||.:.       .:|...:.|::.:......|...|.|..::.|.:.| |.:|  :..:..:
 Worm  1060 RGKLRSIN-------CHERTETADLLGRLRPKQDGGFEWSDGVVISAMRDG-VPLL--VDEISLA 1114

  Fly   516 TASVLQRL----IHDRELQLCDGTT----LLGANRYQ--ALLQQG--FSKEELGKLGFLPIHESF 568
            ..|||:||    ..||.|.|.|..|    :.....:|  |.:..|  :.|:||.|    .:...|
 Worm  1115 EDSVLERLNPLFEEDRALLLSDAGTDTEVVESKPGFQMIATMNPGGDYGKKELSK----ALRNRF 1175

  Fly   569 RVVALAEPPRLGGGQPSWLTPELLSLFLYQELRPLRQSEEAEL------------LAQLCG---- 617
            ..|..:.         .:.|.||:::|..:..|.....|||.:            :|...|    
 Worm  1176 TEVWTSS---------DYTTSELVTIFDQRLARVDATREEARITPTRTATTIVSWIAVFFGKYSH 1231

  Fly   618 --GDLPAGMDQLLKLAQLLRSS-----------QDPL----LQGLAGTLSTRQLLKLARRLAAYP 665
              ...|:..| ::..|:|..|:           :|.|    |..|||         |..||...|
 Worm  1232 VFRHAPSVRD-VVACAELYASAMQAQIENTTAIKDALCAVFLDSLAG---------LTTRLHIDP 1286

  Fly   666 ----ESELSDVHEMLQNTFLARFMPALSRGALEQAIQQVGIKPREIKLKSKKNQIAVEDNS--LR 724
                :..|:.:|..|..|.|.        |.|....:.:|        ::||:.: :|..|  |.
 Worm  1287 VEVFDDALTMLHSELVKTQLL--------GQLSDVQKFIG--------EAKKDAL-IEHASQHLN 1334

  Fly   725 IGSTRWPLGNPTQAQLSKVPHTLFYEMPQHVQLLERLLQDYLIGEHLLLVGNQGVGKNKLVDRLL 789
            :|..|.|.|..|    .|:|.....:.|...:...|:.:..||.:.:||.|..|.||:..|..|.
 Worm  1335 VGHLRVPFGPVT----PKIPKAFSLKAPTCAENFYRIARGLLISKPILLEGAPGCGKSSTVMALA 1395

  Fly   790 ELMQRPREYIQLHRDTTVHSL---TLQATLKDGQVSY--EDSALVQAVRTGHVLVVDEADKAPVN 849
            :|...|...:.|...|.:..|   .:....:||.:::  ||..:::|::.|..:::||.:.|..:
 Worm  1396 QLTGNPITRLNLSDQTDLSDLFGSDVPVLTEDGTMTFRWEDGPVLKAIKKGEWILLDEMNLASQS 1460

  Fly   850 VTCILRTLVESGEMVLADGRRIVPPGEGGRVPNSIETHPDFRL---------------IVLANRP 899
            |.        .|.....|.||::...|..|         :|.:               :...||.
 Worm  1461 VL--------EGLNACFDHRRVLYIAELNR---------EFEIPATSNCRFFACQNPRVQGGNRR 1508

  Fly   900 GFPFLGNDFFAALGDVFS-------CHAISNPDPESEIFLLQQYGPKVPIK-------------- 943
            ..|   ..|.....::::       ...:.|...|..:...:|....|.|.              
 Worm  1509 ALP---KSFINRFTNIYTNDLTKNDIEIVLNGVDEKSLLRTEQRSAMVAISEQLEQISGSFSGGP 1570

  Fly   944 ---TLRTLVNAFGEL---RTLADEGMLNYPYSTREVVSIVKHLERYPEENMSEVVGNVLDFDRYQ 1002
               .||.|:..:..|   |||.:...|.|...||             .|...|::.::  |::..
 Worm  1571 HSFNLRDLLRWYDLLAAGRTLGEAFELVYMTRTR-------------REEDRELMRSI--FEKMM 1620

  Fly  1003 PEALQQVTQVLAKHGIESYAEEEIQAIRKQRILQASVNRHS-GLGVSGPK-------FGK----- 1054
            .|.|  ||:.|      :...:|    ::.||.:.|:.|.: .|||..|:       |..     
 Worm  1621 EEKL--VTKAL------NLTVDE----KEMRIGKCSLKRKTQQLGVQSPRKSLENRLFASQTILM 1673

  Fly  1055 ---------------LDPKNEPHVGGNTWAGGSGGR----DTAGLGGKG-GPFRLDKGHKVHQLS 1099
                           :.|:|            .|.|    :.|.|.||. ....|:......:|.
 Worm  1674 HQIATCVELNWLALLVGPRN------------CGKRSVIENVANLCGKRLRTIALNADTDAQELI 1726

  Fly  1100 DEEKADVPEEIKRAAREMNRKAFEDK------LKEIKMSAHDHKLYAQ----FSEPNRKQVQQLK 1154
            ...:..|.|:....|::...|..|.|      ::::|.:...:||.|.    .||..  .:::::
 Worm  1727 GSYEQVVDEDCLPIAKKQIVKILEHKEAPEAFIEKVKNAGDLNKLEATVELILSEIG--NIEEIQ 1789

  Fly  1155 AVLEAMQTKSKERQW------QKYQTHGD---LDDTRLVEGIT-----------GEKNIYRRRAE 1199
            .||......|...:|      ..| .|||   ::|..|.....           |:..:..|:..
 Worm  1790 DVLNIANQSSMRFEWTDSVFVDAY-LHGDWLLIEDVNLCSAAVLDRLNSCLESGGKLVVAERQNS 1853

  Fly  1200 ANPWADHVQEK--------------------------------PNRLKLVV--DVSGSMYRFNGY 1230
            ..|...|...:                                |:.::.||  .:|..:.|....
 Worm  1854 YEPLEPHPDFRVFLSMDARVGEISRAMRNRSVEIYIEDGWNLWPDDVRTVVGSKMSSELSRIVAR 1918

  Fly  1231 DGRLDRQLEAVVMVMEAFEGFEKKIVYDIIGHSGEGWEIPFVTAGSPPKNDKERFEAIRMMHAHS 1295
            |..:::||....::.|..|.|...:...::|.:.:.|:            |:|            
 Worm  1919 DLTVEQQLHLAALLQENGEHFSMDLALKLVGAAQKDWK------------DQE------------ 1959

  Fly  1296 QFCWSGDSTVKAAREACSTLGAEQDYDNAIVVVLSDANLQRYGIAPKDLAMALKRGEPKVKGYAI 1360
                               :...::.:..|:|       :::.||||.|.:....||     |..
 Worm  1960 -------------------IEENEEIEEEILV-------EKFAIAPKILEICNLSGE-----YEK 1993

  Fly  1361 FIGSLAEEADEINAEMPAGQSFVCMDLTKLPHILQQI 1397
            |..|..:.| ..|.:....::.:...|:..|.|||.:
 Worm  1994 FWISTWQRA-AANTKTANVEAILMTFLSSSPWILQNL 2029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c12.2NP_001259381.1 AAA_5 112..268 CDD:285029 29/105 (28%)
AAA_5 435..595 CDD:285029 43/176 (24%)
AAA_5 770..916 CDD:285029 34/165 (21%)
vWA_F11C1-5a_type 1212..1403 CDD:238732 33/188 (18%)
F55F10.1NP_001368166.1 MDN1 70..4355 CDD:227596 291/1467 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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