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Protein Alignment Vhl and vhl-1
DIOPT Version :9
Sequence 1: | NP_001260885.1 |
Gene: | Vhl / 53433 |
FlyBaseID: | FBgn0041174 |
Length: | 178 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_509889.1 |
Gene: | vhl-1 / 181321 |
WormBaseID: | WBGene00006922 |
Length: | 174 |
Species: | Caenorhabditis elegans |
Alignment Length: | 150 |
Identity: | 35/150 - (23%) |
Similarity: | 68/150 - (45%) |
Gaps: | 17/150 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 EVYVLFANTTYRTLDLYWVCERERENMYLTLKPFEEVRVNTFTTHSWLFRDYYTGERMHVRSQRI 88
|:.|.|.|.....:|::|:...::...|.||...:.:.:.||..|.|:.|..:.|.::.|..:.:
Worm 25 EIRVRFLNRCAYPVDVFWLNPSKQPTKYGTLAQKKYLDIKTFKDHPWVARRSFDGCKVLVNEKEV 89
Fly 89 FQPIRVRVPKSQQSPDQLVDVRSEVLIHFPMRSLRENCLWLVARWLIR--TSNAPRRIIHGYHIP 151
|.| :.:|...:.||:..:|...::|||| :..|..:| .:..|.:| ..:|
Worm 90 FWP--------EPAPRMNLIVRNHCVITMKVQSLRE----IAGRSFLRHNPTEVPNKI---KGLP 139
Fly 152 STLKQQLLSLLTCIESYSRV 171
..|:.::...|...:.||.:
Worm 140 RELQFEVKHFLDRKQEYSEI 159
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Vhl | NP_001260885.1 |
pVHL |
21..162 |
CDD:176472 |
32/139 (23%) |
vhl-1 | NP_509889.1 |
pVHL |
19..157 |
CDD:176472 |
33/146 (23%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4710 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
44 |
1.000 |
Inparanoid score |
I4144 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509532at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0005700 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_107013 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR15160 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
8 | 7.830 |
|
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