Sequence 1: | NP_001245503.1 | Gene: | wds / 53428 | FlyBaseID: | FBgn0040066 | Length: | 361 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013156.1 | Gene: | SPT8 / 850744 | SGDID: | S000004045 | Length: | 602 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 478 | Identity: | 84/478 - (17%) |
---|---|---|---|
Similarity: | 149/478 - (31%) | Gaps: | 202/478 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 VGQPGATTSSNSSASN----------KSSLSVKPNYTLKFTLAGHTKA-VSAVKFSPNGEWLASS 90
Fly 91 SADKLIK---IWGAYDGKFEKTI-SGHKL-------GISDVAW---------------------- 122
Fly 123 ----------SSDSRLLVSGSDD-----KTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIV 172
Fly 173 SGSFDESVRIWDVRTG-------------KCLKTLPAHS-------------------------- 198
Fly 199 ------------DPV-----------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--- 231
Fly 232 ------------CLKTL--IDDD-------------------------------NPPVSFVKFSP 251
Fly 252 NGKYILAATLDNTLKLWDY--------SKGKCLKT----YTGHKNEKYCIFAN----------FS 294
Fly 295 VTGGK-WIVSGSEDNMVYIWNLQ 316 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wds | NP_001245503.1 | WD40 | 64..358 | CDD:238121 | 78/441 (18%) |
WD40 repeat | 75..112 | CDD:293791 | 10/40 (25%) | ||
WD40 repeat | 118..154 | CDD:293791 | 7/72 (10%) | ||
WD40 repeat | 159..195 | CDD:293791 | 12/48 (25%) | ||
WD40 repeat | 202..237 | CDD:293791 | 10/51 (20%) | ||
WD40 repeat | 244..280 | CDD:293791 | 15/47 (32%) | ||
WD40 repeat | 288..325 | CDD:293791 | 7/40 (18%) | ||
WD40 repeat | 331..357 | CDD:293791 | |||
SPT8 | NP_013156.1 | WD40 | 178..>355 | CDD:421866 | 34/176 (19%) |
WD40 repeat | 180..218 | CDD:293791 | 9/37 (24%) | ||
WD40 repeat | 264..302 | CDD:293791 | 5/37 (14%) | ||
WD40 | 304..593 | CDD:421866 | 53/292 (18%) | ||
WD40 repeat | 310..346 | CDD:293791 | 11/35 (31%) | ||
WD40 repeat | 353..408 | CDD:293791 | 5/54 (9%) | ||
WD40 repeat | 362..457 | CDD:293791 | 11/94 (12%) | ||
WD40 repeat | 464..503 | CDD:293791 | 4/38 (11%) | ||
WD40 repeat | 511..558 | CDD:293791 | 15/47 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |