DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment wds and PUB54

DIOPT Version :9

Sequence 1:	NP_001245503.1	Gene:	wds / 53428	FlyBaseID:	FBgn0040066	Length:	361	Species:	Drosophila melanogaster
Sequence 2:	NP_171674.2	Gene:	PUB54 / 839251	AraportID:	AT1G01680	Length:	308	Species:	Arabidopsis thaliana

Alignment Length:	168	Identity:	36/168 - (21%)
Similarity:	58/168 - (34%)	Gaps:	47/168 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   106 FEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSL-------KTLKGH---SNYVF 160
            |..|.|..:|..|::....||.|  :.|.:...|..::...|.:       ..:.||   ...|.
plant    41 FSLTTSSSRLEQSEIDAIQDSEL--NTSVNSLYKYRDICINKGVNEKDVDTSMISGHDVGEGIVE 103

  Fly   161 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL------IVSSSYD 219
            ....|..:||::.                      |.:||    |::|..|:      .||....
plant   104 LIYQNIITNLVMG----------------------AAADP----HYSRGMSITSRKAEYVSQHAP 142

  Fly   220 GLCRIWDTASGQCLKTLIDD---DNPPVSFVKFSPNGK 254
            ..|:||....|:.:|.....   .||..||.:||.:.:
plant   143 HSCKIWFICKGKLIKQRERSFYLGNPSDSFSEFSTSAE 180

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
wds	NP_001245503.1	WD40	64..358	CDD:238121	36/168 (21%)
		WD40 repeat	75..112	CDD:293791	2/5 (40%)
		WD40 repeat	118..154	CDD:293791	7/42 (17%)
		WD40 repeat	159..195	CDD:293791	4/35 (11%)
		WD40 repeat	202..237	CDD:293791	10/40 (25%)
		WD40 repeat	244..280	CDD:293791	4/11 (36%)
		WD40 repeat	288..325	CDD:293791
		WD40 repeat	331..357	CDD:293791
PUB54	NP_171674.2	STK_N	5..153	CDD:238947	28/139 (20%)
		RING-Ubox_WDSUB1_like	237..278	CDD:319569
		U-box domain, a modified RING finger	239..277	CDD:319569
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D957291at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010