DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wds and Daw1

DIOPT Version :10

Sequence 1:NP_524984.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001359172.1 Gene:Daw1 / 71227 MGIID:1923089 Length:428 Species:Mus musculus


Alignment Length:293 Identity:97/293 - (33%)
Similarity:163/293 - (55%) Gaps:7/293 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 TLAGHTKAVSAVKF-SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
            ||.||...|.|:.| :|.|:.:|:.|.||..|:|.|..||...|..||...|..::::..|.::.
Mouse   142 TLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVA 206

  Fly   131 SGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP 195
            :||.|.|.|:|::..|:.:.||.||...:...:|:...:.|::||||.:|.:||..||:.:.||.
Mouse   207 TGSMDTTAKLWDIQNGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLI 271

  Fly   196 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 260
            .|...:|:..||.|.|||::.|.|..|.:||..||:.:.||...|:..:... |...||.|..|:
Mouse   272 GHCAEISSALFNWDCSLILTGSMDKTCMLWDATSGKYVATLTGHDDEILDSC-FDYTGKLIATAS 335

  Fly   261 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ 325
            .|.|.::::.:..||:....||:.|...|  :|:..|.: :::||.|....||::|:.:.:|.|:
Mouse   336 ADGTARVYNATTRKCVTKLEGHEGEISKI--SFNPQGNR-LLTGSSDKTARIWDVQTGQCLQVLE 397

  Fly   326 GHTDTVLCTACHPTENIIASAALENDKTIKLWK 358
            ||||.:...|.:...||:.:.:  .|.:.::|:
Mouse   398 GHTDEIFSCAFNYKGNIVITGS--KDNSCRIWR 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_524984.1 WD40 <63..361 CDD:441893 97/293 (33%)
WD40 repeat 75..112 CDD:293791 15/37 (41%)
WD40 repeat 118..154 CDD:293791 10/35 (29%)
WD40 repeat 159..195 CDD:293791 12/35 (34%)
WD40 repeat 202..237 CDD:293791 15/34 (44%)
WD40 repeat 244..280 CDD:293791 9/35 (26%)
WD40 repeat 288..325 CDD:293791 10/36 (28%)
WD40 repeat 331..357 CDD:293791 4/25 (16%)
Daw1NP_001359172.1 WD40 100..428 CDD:441893 96/291 (33%)
WD40 repeat 109..145 CDD:293791 2/2 (100%)
WD40 repeat 150..188 CDD:293791 15/37 (41%)
WD40 repeat 194..230 CDD:293791 10/35 (29%)
WD40 repeat 235..271 CDD:293791 12/35 (34%)
WD40 repeat 278..313 CDD:293791 15/34 (44%)
WD40 repeat 319..355 CDD:293791 9/36 (25%)
WD40 repeat 361..397 CDD:293791 10/38 (26%)
WD40 repeat 403..427 CDD:293791 4/25 (16%)

Return to query results.
Submit another query.