DRSC/TRiP Functional Genomics Resources

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Protein Alignment wds and Daw1

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001359172.1 Gene:Daw1 / 71227 MGIID:1923089 Length:428 Species:Mus musculus


Alignment Length:293 Identity:97/293 - (33%)
Similarity:163/293 - (55%) Gaps:7/293 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 TLAGHTKAVSAVKF-SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
            ||.||...|.|:.| :|.|:.:|:.|.||..|:|.|..||...|..||...|..::::..|.::.
Mouse   142 TLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVA 206

  Fly   131 SGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP 195
            :||.|.|.|:|::..|:.:.||.||...:...:|:...:.|::||||.:|.:||..||:.:.||.
Mouse   207 TGSMDTTAKLWDIQNGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLI 271

  Fly   196 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 260
            .|...:|:..||.|.|||::.|.|..|.:||..||:.:.||...|:..:... |...||.|..|:
Mouse   272 GHCAEISSALFNWDCSLILTGSMDKTCMLWDATSGKYVATLTGHDDEILDSC-FDYTGKLIATAS 335

  Fly   261 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ 325
            .|.|.::::.:..||:....||:.|...|  :|:..|.: :::||.|....||::|:.:.:|.|:
Mouse   336 ADGTARVYNATTRKCVTKLEGHEGEISKI--SFNPQGNR-LLTGSSDKTARIWDVQTGQCLQVLE 397

  Fly   326 GHTDTVLCTACHPTENIIASAALENDKTIKLWK 358
            ||||.:...|.:...||:.:.:  .|.:.::|:
Mouse   398 GHTDEIFSCAFNYKGNIVITGS--KDNSCRIWR 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121 96/291 (33%)
WD40 repeat 75..112 CDD:293791 15/37 (41%)
WD40 repeat 118..154 CDD:293791 10/35 (29%)
WD40 repeat 159..195 CDD:293791 12/35 (34%)
WD40 repeat 202..237 CDD:293791 15/34 (44%)
WD40 repeat 244..280 CDD:293791 9/35 (26%)
WD40 repeat 288..325 CDD:293791 10/36 (28%)
WD40 repeat 331..357 CDD:293791 4/25 (16%)
Daw1NP_001359172.1 WD40 99..133 CDD:197651
WD40 repeat 109..145 CDD:293791 2/2 (100%)
WD40 139..428 CDD:238121 96/291 (33%)
WD40 repeat 150..188 CDD:293791 15/37 (41%)
WD40 repeat 194..230 CDD:293791 10/35 (29%)
WD40 repeat 235..271 CDD:293791 12/35 (34%)
WD40 repeat 278..313 CDD:293791 15/34 (44%)
WD40 repeat 319..355 CDD:293791 9/36 (25%)
WD40 repeat 361..397 CDD:293791 10/38 (26%)
WD40 repeat 403..427 CDD:293791 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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