DRSC/TRiP Functional Genomics Resources

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Protein Alignment wds and daw1

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001037817.1 Gene:daw1 / 556760 ZFINID:ZDB-GENE-050419-255 Length:418 Species:Danio rerio


Alignment Length:281 Identity:98/281 - (34%)
Similarity:152/281 - (54%) Gaps:10/281 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 TLAGHTKAVSAVKF-SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLV 130
            ||.||...|.|:.| :|.|:.:|:.|.||..|:|.|..||...|..||...|..:|::..|.|:.
Zfish   129 TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVA 193

  Fly   131 SGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP 195
            :||.|.|.|:|::.:|:.:.||.||...:....||...:.:|:||||.:..:|||.:|:.:..|.
Zfish   194 TGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS 258

  Fly   196 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 260
            .|...:|.|.||.|.|||.::|.|..|::||...||||.||: ..|..|..|.|:..|:.|..|:
Zfish   259 GHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLL-GHNDEVLDVCFNYTGQLIATAS 322

  Fly   261 LDNTLKLWDYSKGKCLKTYTGHKNE--KYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQK 323
            .|.|.:::.....:||....|||.|  |.|    |:..|.: :::.|.|....:|.:::...:|.
Zfish   323 ADGTSRVFSTDTFQCLCQLEGHKGEISKVC----FNAQGSR-VLTASVDKTSRVWCVKTGACLQV 382

  Fly   324 LQGHTDTVL-CTACHPTENII 343
            |:||:|.:. |...:..:.||
Zfish   383 LEGHSDEIFSCAFNYEGDTII 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121 98/281 (35%)
WD40 repeat 75..112 CDD:293791 15/37 (41%)
WD40 repeat 118..154 CDD:293791 12/35 (34%)
WD40 repeat 159..195 CDD:293791 11/35 (31%)
WD40 repeat 202..237 CDD:293791 18/34 (53%)
WD40 repeat 244..280 CDD:293791 10/35 (29%)
WD40 repeat 288..325 CDD:293791 7/36 (19%)
WD40 repeat 331..357 CDD:293791 3/14 (21%)
daw1NP_001037817.1 CEP19 4..>81 CDD:291594
WD40 84..372 CDD:238121 89/248 (36%)
WD40 88..405 CDD:225201 98/281 (35%)
WD 1 90..129 98/281 (35%)
WD40 repeat 95..132 CDD:293791 2/2 (100%)
WD 2 132..172 16/39 (41%)
WD40 repeat 137..175 CDD:293791 15/37 (41%)
WD 3 175..214 13/38 (34%)
WD40 repeat 181..217 CDD:293791 12/35 (34%)
WD 4 217..256 13/38 (34%)
WD40 repeat 222..258 CDD:293791 11/35 (31%)
WD 5 259..298 18/38 (47%)
WD40 repeat 265..300 CDD:293791 18/34 (53%)
WD 6 301..340 11/38 (29%)
WD40 repeat 306..342 CDD:293791 10/35 (29%)
WD 7 343..384 12/45 (27%)
WD40 repeat 348..384 CDD:293791 8/40 (20%)
WD40 376..>405 CDD:197651 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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