DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wds and poc1b

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_956412.1 Gene:poc1b / 386932 ZFINID:ZDB-GENE-031118-54 Length:490 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121
WD40 repeat 75..112 CDD:293791
WD40 repeat 118..154 CDD:293791
WD40 repeat 159..195 CDD:293791
WD40 repeat 202..237 CDD:293791
WD40 repeat 244..280 CDD:293791
WD40 repeat 288..325 CDD:293791
WD40 repeat 331..357 CDD:293791
poc1bNP_956412.1 WD40 10..298 CDD:238121
WD40 14..>300 CDD:225201
WD 1. /evidence=ECO:0000255 16..55
WD40 repeat 22..58 CDD:293791
WD 2. /evidence=ECO:0000255 58..97
WD40 repeat 63..99 CDD:293791
WD 3. /evidence=ECO:0000255 100..139
WD40 repeat 106..141 CDD:293791
WD 4. /evidence=ECO:0000255 142..181
WD40 repeat 147..181 CDD:293791
WD 5. /evidence=ECO:0000255 184..223
WD40 repeat 189..225 CDD:293791
WD 6. /evidence=ECO:0000255 226..265
WD40 repeat 231..254 CDD:293791
WD 7. /evidence=ECO:0000255 268..307
WD40 repeat 273..314 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..427
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.