DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wds and ago

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_523922.1 Gene:ago / 38516 FlyBaseID:FBgn0041171 Length:1326 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121
WD40 repeat 75..112 CDD:293791
WD40 repeat 118..154 CDD:293791
WD40 repeat 159..195 CDD:293791
WD40 repeat 202..237 CDD:293791
WD40 repeat 244..280 CDD:293791
WD40 repeat 288..325 CDD:293791
WD40 repeat 331..357 CDD:293791
agoNP_523922.1 F-box-like 892..938 CDD:289689
WD40 <981..1274 CDD:225201
WD40 988..1264 CDD:238121
WD40 repeat 998..1033 CDD:293791
WD40 repeat 1039..1073 CDD:293791
WD40 repeat 1078..1112 CDD:293791
WD40 repeat 1119..1152 CDD:293791
WD40 repeat 1158..1192 CDD:293791
WD40 repeat 1200..1232 CDD:293791
WD40 repeat 1241..1263 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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