DRSC/TRiP Functional Genomics Resources

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Protein Alignment wds and WSB1

DIOPT Version :10

Sequence 1:NP_524984.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_056441.6 Gene:WSB1 / 26118 HGNCID:19221 Length:421 Species:Homo sapiens


Alignment Length:369 Identity:103/369 - (27%)
Similarity:152/369 - (41%) Gaps:84/369 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GQPGATTSS-------NSSASNKSSLSVKPN----------YTLKFTLAGHTKAVSAVKFSPNGE 85
            |....|.||       ||....|:    ||.          ::|.|..:...|....|    |.|
Human    74 GTKNVTNSSSLRLPRQNSDGGQKN----KPREHIIDCGDIVWSLAFGSSVPEKQSRCV----NIE 130

  Fly    86 W-----------LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVSGSDDKTL 138
            |           ||:...:..||||..|.||....:..|...:.|:.::.| |.:|||.|.||||
Human   131 WHRFRFGQDQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTL 195

  Fly   139 KVWEL-STGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVS 202
            :||:| ..|..:|.|:||.|:|:.|.|:|.|:::.|....::|.:|::.....::.|..|...|.
Human   196 RVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVV 260

  Fly   203 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP------------VSFVKFSPNGKY 255
            |..|:.||:|:.::|||....|||..:|..|........||            |..|.||.:|.:
Human   261 ACDFSPDGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLH 325

  Fly   256 ILAATLDNTLKLW----DY-------SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNM 309
            :.:...|..::.|    ||       |.|.|            |.|:    |.|..:.:|:.|..
Human   326 VASLADDKMVRFWRIDEDYPVQVAPLSNGLC------------CAFS----TDGSVLAAGTHDGS 374

  Fly   310 VYIWNLQSKEVVQKLQGHTDTVLCTACHPTENI----IASAALE 349
            ||.|  .:...|..|| |...:......||:.:    |.|..||
Human   375 VYFW--ATPRQVPSLQ-HLCRMSIRRVMPTQEVQELPIPSKLLE 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_524984.1 WD40 <63..361 CDD:441893 94/327 (29%)
WD40 repeat 75..112 CDD:293791 13/47 (28%)
WD40 repeat 118..154 CDD:293791 17/37 (46%)
WD40 repeat 159..195 CDD:293791 8/35 (23%)
WD40 repeat 202..237 CDD:293791 13/34 (38%)
WD40 repeat 244..280 CDD:293791 12/46 (26%)
WD40 repeat 288..325 CDD:293791 10/36 (28%)
WD40 repeat 331..357 CDD:293791 6/23 (26%)
WSB1NP_056441.6 WD 1 32..71
WD40 <38..378 CDD:441893 92/327 (28%)
WD40 repeat 59..105 CDD:293791 9/34 (26%)
WD 2 124..165 13/44 (30%)
WD 3 168..208 16/39 (41%)
WD40 repeat 174..212 CDD:293791 17/37 (46%)
WD 4 212..251 11/38 (29%)
WD40 repeat 217..253 CDD:293791 8/35 (23%)
WD 5 254..293 15/38 (39%)
WD40 repeat 261..299 CDD:293791 13/37 (35%)
WD 6 309..346 9/36 (25%)
WD40 repeat 314..353 CDD:293791 9/38 (24%)
SOCS_WSB1_SWIP1 382..421 CDD:239715 10/35 (29%)
Blue background indicates that the domain is not in the aligned region.

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