DRSC/TRiP Functional Genomics Resources

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Protein Alignment wds and POC1A

DIOPT Version :10

Sequence 1:NP_524984.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_056241.3 Gene:POC1A / 25886 HGNCID:24488 Length:407 Species:Homo sapiens


Alignment Length:296 Identity:99/296 - (33%)
Similarity:154/296 - (52%) Gaps:20/296 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SLQPNSVGQPGATTSSNSSASNKSSLS-----------VKP-NYTLKFTLAGHTKAVSAVKFSPN 83
            ||:.:..|...|.|..:.|.:.|...|           :|| :...:||  ||..||:.|.|||:
Human    10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFT--GHKDAVTCVNFSPS 72

  Fly    84 GEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGK 147
            |..|||.|.||.::|| ..:.|.|.|: ..|...:..|.:.||.:..|:.|||||:|||.....|
Human    73 GHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQK 136

  Fly   148 SLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 212
            .|.:|..|.|:|.|..|:|...||||.|.|::|::||..:.:|:.:...|...|:.|.|:..|:.
Human   137 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

  Fly   213 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 277
            |.::..|...::||..:.:.|:. ....:..|:.:.|.|:|.|::.|:.|:|||:.|..:|:.|.
Human   202 IAAAGMDNTVKVWDVRTHRLLQH-YQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLY 265

  Fly   278 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW 313
            |..||:.....:  .||.| |::..||..|..|.:|
Human   266 TLHGHQGPATTV--AFSRT-GEYFASGGSDEQVMVW 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_524984.1 WD40 <63..361 CDD:441893 89/252 (35%)
WD40 repeat 75..112 CDD:293791 17/37 (46%)
WD40 repeat 118..154 CDD:293791 15/35 (43%)
WD40 repeat 159..195 CDD:293791 14/35 (40%)
WD40 repeat 202..237 CDD:293791 8/34 (24%)
WD40 repeat 244..280 CDD:293791 14/35 (40%)
WD40 repeat 288..325 CDD:293791 9/26 (35%)
WD40 repeat 331..357 CDD:293791
POC1ANP_056241.3 WD40 <6..298 CDD:441893 98/294 (33%)
WD 1 17..56 8/38 (21%)
WD40 repeat 23..59 CDD:293791 8/37 (22%)
WD 2 59..98 19/39 (49%)
WD40 repeat 64..100 CDD:293791 17/36 (47%)
WD 3 101..140 15/38 (39%)
WD40 repeat 107..140 CDD:293791 14/32 (44%)
WD 4 143..182 16/38 (42%)
WD40 repeat 148..184 CDD:293791 14/35 (40%)
WD 5 185..224 10/38 (26%)
WD40 repeat 190..226 CDD:293791 9/36 (25%)
WD 6 227..266 13/38 (34%)
WD40 repeat 232..255 CDD:293791 9/22 (41%)
WD 7 269..308 11/33 (33%)
Blue background indicates that the domain is not in the aligned region.

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