DRSC/TRiP Functional Genomics Resources

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Protein Alignment wds and utp13

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_587989.2 Gene:utp13 / 2539337 PomBaseID:SPCC16A11.02 Length:777 Species:Schizosaccharomyces pombe


Alignment Length:292 Identity:84/292 - (28%)
Similarity:138/292 - (47%) Gaps:78/292 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SLSVKPN-YTLKFTLAGHTKAVSAVKFSP---NG--EWLASSSADKLIK---------------- 97
            :|:::.| |.......|||.:|:||...|   ||  .:|||||.|:.:|                
pombe   392 NLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNR 456

  Fly    98 -IWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFC 161
             :|         ||..|...::.:..|.|.|::.|.|.|||:|:|:.|||:.:..|:||...|:.
pombe   457 AVW---------TIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWA 512

  Fly   162 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
            |:|||.|..:.|||.|.::|||:|.|.:|::||..|:..:..:.:...|:.:||::.|||.::|.
pombe   513 CSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWS 577

  Fly   227 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 291
            .:||:|:                         |||||                  |::..:.:.:
pombe   578 LSSGECV-------------------------ATLDN------------------HEDRVWALAS 599

  Fly   292 NFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQK 323
            .|.   |..:|||..|.:|.:|...::|.:.|
pombe   600 RFD---GSLLVSGGADAVVSVWKDVTEEYIAK 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121 81/282 (29%)
WD40 repeat 75..112 CDD:293791 16/58 (28%)
WD40 repeat 118..154 CDD:293791 14/35 (40%)
WD40 repeat 159..195 CDD:293791 17/35 (49%)
WD40 repeat 202..237 CDD:293791 10/34 (29%)
WD40 repeat 244..280 CDD:293791 5/35 (14%)
WD40 repeat 288..325 CDD:293791 10/36 (28%)
WD40 repeat 331..357 CDD:293791
utp13NP_587989.2 WD40 52..542 CDD:225201 54/158 (34%)
WD40 62..535 CDD:238121 51/151 (34%)
WD40 repeat 65..101 CDD:293791
WD40 repeat 106..142 CDD:293791
WD40 repeat 149..186 CDD:293791
WD40 repeat 192..231 CDD:293791
WD40 316..619 CDD:238121 81/281 (29%)
WD40 repeat 328..362 CDD:293791
WD40 repeat 367..408 CDD:293791 3/15 (20%)
WD40 repeat 414..463 CDD:293791 15/57 (26%)
WD40 repeat 468..504 CDD:293791 13/35 (37%)
WD40 repeat 511..546 CDD:293791 16/34 (47%)
WD40 repeat 552..588 CDD:293791 12/60 (20%)
Utp13 640..777 CDD:285789
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1422
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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