DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wds and WDR90

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_016878512.1 Gene:WDR90 / 197335 HGNCID:26960 Length:1838 Species:Homo sapiens


Alignment Length:358 Identity:76/358 - (21%)
Similarity:130/358 - (36%) Gaps:111/358 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 AGHTKAVSAVKFSPNGEWLASSS------ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 127
            :||:..:|.:..|.:.:.|||:|      |...|::|....|..:..|..|...:..:|:|.|.|
Human  1243 SGHSAEISTLALSHSAQVLASASGRSSTTAHCQIRVWDVSGGLCQHLIFPHSTTVLALAFSPDDR 1307

  Fly   128 LLVS--GSDDKTLKVWELST--------------GKSLK-------TLKGHSNYVF--------- 160
            |||:  ..|.:||.:|..:|              |.:..       |..|.....|         
Human  1308 LLVTLGDHDGRTLALWGTATYDLVSSTRLPEPVHGVAFNPWDAGELTCVGQGTVTFWLLQQRGAD 1372

  Fly   161 ----------------------CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 203
                                  |....|   |:..|:....|.:||.|.|:|..:..|....:..
Human  1373 ISLQVRREPVPEAVGAGELTSLCYGAPP---LLYCGTSSGQVCVWDTRAGRCFLSWEADDGGIGL 1434

  Fly   204 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-------------- 254
            :.|:  ||.:||.|..|..|:|...:              ||.::...:|.              
Human  1435 LLFS--GSRLVSGSSTGRLRLWAVGA--------------VSELRCKGSGARSSSVFMEHELVLD 1483

  Fly   255 -YILAATLDNTL----------KLW--DYSKGKCLKTYTGHKNE-KYCIFANFSVTGGKWIVSGS 305
             .:::|:.|:::          .||  .:::|...:..:||::: ...:|:    .|.....:.|
Human  1484 GAVVSASFDDSVDMGVVGTTAGTLWFVSWAEGTSTRLISGHRSKVNEVVFS----PGESHCATCS 1544

  Fly   306 EDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHP 338
            ||..|.:|.|.|.|:|.:.|....:.||.|..|
Human  1545 EDGSVRVWALASMELVIQFQVLNQSCLCLAWSP 1577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121 76/358 (21%)
WD40 repeat 75..112 CDD:293791 11/42 (26%)
WD40 repeat 118..154 CDD:293791 14/58 (24%)
WD40 repeat 159..195 CDD:293791 11/66 (17%)
WD40 repeat 202..237 CDD:293791 9/34 (26%)
WD40 repeat 244..280 CDD:293791 8/62 (13%)
WD40 repeat 288..325 CDD:293791 11/36 (31%)
WD40 repeat 331..357 CDD:293791 4/8 (50%)
WDR90XP_016878512.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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