DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wds and wdr-5.1

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_497749.1 Gene:wdr-5.1 / 175474 WormBaseID:WBGene00006474 Length:376 Species:Caenorhabditis elegans


Alignment Length:361 Identity:233/361 - (64%)
Similarity:282/361 - (78%) Gaps:17/361 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PPQQ----PLPTAPSG----------PNSLQP-NSVG--QPGATTSSNSSASNKSSLSVKPNYTL 64
            |.||    .:|.||.|          |||:.| |..|  .|||:..:.:..:..:|.|...||.|
 Worm    15 PTQQIDQLTVPNAPDGGSSAPAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKL 79

  Fly    65 KFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 129
            ..||.||||::|:.||||.|::|.:|||||.:|||.......|:|::|||||::|:|||||||.:
 Worm    80 MCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCV 144

  Fly   130 VSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 194
            ||.|||||||::|:.|.:..||||||:||||||||||||:|:||||||||||||||:||.|:|||
 Worm   145 VSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTL 209

  Fly   195 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 259
            ||||||||||.||||||||.|.|||||.||||||:|||:|||:||:||||:|||||||||||||:
 Worm   210 PAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS 274

  Fly   260 TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKL 324
            .||:||||||:||||.||.||||:|.||||||||||||||||:|||||..:||||||::|:||.|
 Worm   275 NLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCL 339

  Fly   325 QGHTDTVLCTACHPTENIIASAALENDKTIKLWKSD 360
            :|||..||.:.|||.:|||||.|||.|..|.:|:||
 Worm   340 EGHTQPVLASDCHPVQNIIASGALEPDNKIHIWRSD 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121 210/293 (72%)
WD40 repeat 75..112 CDD:293791 17/36 (47%)
WD40 repeat 118..154 CDD:293791 22/35 (63%)
WD40 repeat 159..195 CDD:293791 30/35 (86%)
WD40 repeat 202..237 CDD:293791 28/34 (82%)
WD40 repeat 244..280 CDD:293791 28/35 (80%)
WD40 repeat 288..325 CDD:293791 28/36 (78%)
WD40 repeat 331..357 CDD:293791 15/25 (60%)
wdr-5.1NP_497749.1 WD40 <76..372 CDD:225201 212/295 (72%)
WD40 79..373 CDD:238121 210/293 (72%)
WD40 repeat 90..127 CDD:293791 17/36 (47%)
WD40 repeat 133..169 CDD:293791 22/35 (63%)
WD40 repeat 174..210 CDD:293791 30/35 (86%)
WD40 repeat 217..252 CDD:293791 28/34 (82%)
WD40 repeat 259..295 CDD:293791 28/35 (80%)
WD40 repeat 303..340 CDD:293791 28/36 (78%)
WD40 repeat 346..372 CDD:293791 15/25 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157521
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H59931
Inparanoid 1 1.050 483 1.000 Inparanoid score I801
Isobase 1 0.950 - 0 Normalized mean entropy S633
OMA 1 1.010 - - QHG53955
OrthoDB 1 1.010 - - D368256at33208
OrthoFinder 1 1.000 - - FOG0002159
OrthoInspector 1 1.000 - - oto20843
orthoMCL 1 0.900 - - OOG6_101464
Panther 1 1.100 - - LDO PTHR22847
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1422
SonicParanoid 1 1.000 - - X2149
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

Return to query results.
Submit another query.