DRSC/TRiP Functional Genomics Resources

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Protein Alignment wds and WDR49

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001353086.1 Gene:WDR49 / 151790 HGNCID:26587 Length:1049 Species:Homo sapiens


Alignment Length:312 Identity:70/312 - (22%)
Similarity:124/312 - (39%) Gaps:63/312 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS--------- 123
            |.||:.:|.||:|....:.|.|.|.||::::|...          |:|.|..:|.|         
Human   399 LWGHSASVIAVQFFVERKQLFSFSKDKVLRLWDIQ----------HQLSIQRIACSFPKSQDFRC 453

  Fly   124 ------SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 182
                  :..||.:|.::...|...:   .::.|.:|.|...|.|..:|.....::|.....:|..
Human   454 LFHFDEAHGRLFISFNNQLALLAMK---SEASKRVKSHEKAVTCVLYNSILKQVISSDTGSTVSF 515

  Fly   183 WDVRTGKCLKTLP-AHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 245
            |.:.||:.:|... .|.: .:|.:..:.:.:.:::.|.||..:||| .:|.|..||....:..|.
Human   516 WMIDTGQKIKQFTGCHGNAEISTMALDANETRLLTGSTDGTVKIWD-FNGYCHHTLNVGQDGAVD 579

  Fly   246 FVKFSPNGKYILAATLDNTLKLWDYSKGKCL-KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNM 309
            ..:.....|.||....:.    :||:..|.: :..|..:.:.   |..|.:...:|         
Human   580 ISQILILKKKILVTGWER----YDYASWKTIGRAITVFRPQN---FNQFFIQPEEW--------- 628

  Fly   310 VYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSDT 361
                    |..:|    |.|.:||.|..|.:.::..:   .|..|.||.:.|
Human   629 --------KGGIQ----HHDDILCAAFLPPQTLVTGS---YDGEIVLWNNST 665

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121 68/307 (22%)
WD40 repeat 75..112 CDD:293791 10/36 (28%)
WD40 repeat 118..154 CDD:293791 7/50 (14%)
WD40 repeat 159..195 CDD:293791 9/35 (26%)
WD40 repeat 202..237 CDD:293791 10/34 (29%)
WD40 repeat 244..280 CDD:293791 7/36 (19%)
WD40 repeat 288..325 CDD:293791 5/36 (14%)
WD40 repeat 331..357 CDD:293791 6/25 (24%)
WDR49NP_001353086.1 WD40 repeat 143..186 CDD:293791
WD40 repeat 192..231 CDD:293791
WD40 repeat 236..308 CDD:293791
WD40 259..561 CDD:330360 40/174 (23%)
WD40 repeat 318..356 CDD:293791