DRSC/TRiP Functional Genomics Resources

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Protein Alignment wds and LOC1276582

DIOPT Version :10

Sequence 1:NP_524984.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_061503394.1 Gene:LOC1276582 / 1276582 VectorBaseID:AGAMI1_008190 Length:828 Species:Anopheles gambiae


Alignment Length:319 Identity:77/319 - (24%)
Similarity:140/319 - (43%) Gaps:41/319 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VGQPGATTSSNSSASNKSSLSVKP--------------NYTLKFTLAGHTK-------------- 73
            :|..|....|...|:..|||.:..              |::|.|..|.|..              
Mosquito   339 IGTNGCEIYSLELANFSSSLRLLKTCHTNAVYDIAFPYNFSLVFATASHESIRIWSTSKMQELLR 403

  Fly    74 ------AVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLGISDVAWSSDSRLLVS 131
                  |.|::.||.:|:.:.|:..|.:|:.:....||....| :.|..|.|.||.:|:.:::||
Mosquito   404 IVVPNFASSSIVFSRDGKSIISAWNDGVIRAFTPLSGKLIYAIPNAHNKGCSSVAVTSNGKIVVS 468

  Fly   132 GSDDKTLKVWELS--TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL 194
            |..:..::||::.  ....:..||.|...:...:.|.....:||.|.|.|..|||:........:
Mosquito   469 GGIEGQVRVWKIDPYVQSLIGVLKEHYGPIESVHINNYDTEVVSASRDGSCVIWDLIRLTRKHVI 533

  Fly   195 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 259
            .||:..::|.:| ..|..|:::..|.|...|:...|..::.:....:.|::.:..:..|:|.::|
Mosquito   534 FAHTQFIAAQYF-PTGVQILTAGSDKLIGYWEAYDGSLVREVEGSKSGPINAIDMNMMGEYFVSA 597

  Fly   260 TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSK 318
            ..|..::||:|..|..:....||.:.  ...|.:| ..||::|:||.|..:::|.:..|
Mosquito   598 GTDQIVRLWNYQLGVEVAVGIGHASA--ITSARYS-PNGKFLVTGSSDGGIFVWKVPEK 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_524984.1 WD40 <63..361 CDD:441893 69/279 (25%)
WD40 repeat 75..112 CDD:293791 10/37 (27%)
WD40 repeat 118..154 CDD:293791 10/37 (27%)
WD40 repeat 159..195 CDD:293791 9/35 (26%)
WD40 repeat 202..237 CDD:293791 8/34 (24%)
WD40 repeat 244..280 CDD:293791 8/35 (23%)
WD40 repeat 288..325 CDD:293791 10/31 (32%)
WD40 repeat 331..357 CDD:293791
LOC1276582XP_061503394.1 None
Blue background indicates that the domain is not in the aligned region.

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