DRSC/TRiP Functional Genomics Resources

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Protein Alignment wds and ahi1

DIOPT Version :9

Sequence 1:NP_001245503.1 Gene:wds / 53428 FlyBaseID:FBgn0040066 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_004914631.2 Gene:ahi1 / 100487301 XenbaseID:XB-GENE-5879819 Length:1211 Species:Xenopus tropicalis


Alignment Length:326 Identity:86/326 - (26%)
Similarity:165/326 - (50%) Gaps:29/326 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 PNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK---LIKIWGAYDGKFEKTISGHKLGISDVA 121
            ||..:....|||....| :.||.:|:.||::.||:   .|.::....|:....:.||...:.|:.
 Frog   557 PNKRILSLRAGHMGCFS-ICFSNDGKTLAAACADRDGYPIYLYEIPSGECLGELHGHLNVVYDLC 620

  Fly   122 WSSDSRLLVSGSDDKTLKVWEL--STGKSLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 183
            ||.:.:.|::.|.|.|:::|::  ....:||.|. |.::|:...|:|::| .:|:|.:|..:|:|
 Frog   621 WSRNDQHLLTASSDATVRLWKIENEASSALKVLP-HPSFVYTAKFHPKANSFVVTGCYDAVIRVW 684

  Fly   184 DVR----TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT----------ASGQCLK 234
            :|.    .|:.|:....|:..::.:.|:.:|..:.|....||..||||          .....:.
 Frog   685 NVNVKESNGQLLQEFDGHNSFINTLCFDIEGLQMYSGDSSGLIIIWDTHISEKSRLNPVQNWSIF 749

  Fly   235 TLIDDD---NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 296
            .:|.:|   ..||:.::..|||:.:|..:.|:||::.|. :....|.|.|..|.:..:.:.|:..
 Frog   750 KIIKEDYMKGIPVNHLQLHPNGRRLLIHSKDSTLRIMDL-RILAAKKYIGATNYREKLRSAFTPC 813

  Fly   297 GGKWIVSGSEDNMVYIWNLQSKEVVQKLQ--GHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359
             |.::.:||||.:.|:||.::.:.|.|..  .:|..:...|.||.|:::|..|...::.:.::..
 Frog   814 -GTFVFAGSEDRIAYVWNAETGDQVAKYSELSYTAPLRDVAFHPHEHMVAFCAFGQNQPVLVYIY 877

  Fly   360 D 360
            |
 Frog   878 D 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wdsNP_001245503.1 WD40 64..358 CDD:238121 83/318 (26%)
WD40 repeat 75..112 CDD:293791 10/39 (26%)
WD40 repeat 118..154 CDD:293791 11/37 (30%)
WD40 repeat 159..195 CDD:293791 12/40 (30%)
WD40 repeat 202..237 CDD:293791 9/44 (20%)
WD40 repeat 244..280 CDD:293791 10/35 (29%)
WD40 repeat 288..325 CDD:293791 11/36 (31%)
WD40 repeat 331..357 CDD:293791 6/25 (24%)
ahi1XP_004914631.2 WD40 567..866 CDD:238121 81/302 (27%)
WD40 repeat 571..611 CDD:293791 10/40 (25%)
WD40 repeat 617..654 CDD:293791 10/36 (28%)
WD40 repeat 659..700 CDD:293791 12/40 (30%)
WD40 repeat 707..755 CDD:293791 10/47 (21%)
WD40 repeat 762..797 CDD:293791 10/35 (29%)
WD40 repeat 805..842 CDD:293791 11/37 (30%)
SH3_AHI-1 1005..1056 CDD:212746
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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