Sequence 1: | NP_001245503.1 | Gene: | wds / 53428 | FlyBaseID: | FBgn0040066 | Length: | 361 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002933313.1 | Gene: | wdsub1 / 100487088 | XenbaseID: | XB-GENE-964629 | Length: | 485 | Species: | Xenopus tropicalis |
Alignment Length: | 313 | Identity: | 84/313 - (26%) |
---|---|---|---|
Similarity: | 147/313 - (46%) | Gaps: | 35/313 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSRLL 129
Fly 130 VSGSDDKTLKVWELSTGKSLKTLKGHS-NYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 193
Fly 194 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKY- 255
Fly 256 -------ILAATLDNTLKLWDYS----KG---KCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGS 305
Fly 306 EDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWK 358 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
wds | NP_001245503.1 | WD40 | 64..358 | CDD:238121 | 82/311 (26%) |
WD40 repeat | 75..112 | CDD:293791 | 11/39 (28%) | ||
WD40 repeat | 118..154 | CDD:293791 | 9/35 (26%) | ||
WD40 repeat | 159..195 | CDD:293791 | 10/35 (29%) | ||
WD40 repeat | 202..237 | CDD:293791 | 10/34 (29%) | ||
WD40 repeat | 244..280 | CDD:293791 | 11/50 (22%) | ||
WD40 repeat | 288..325 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 331..357 | CDD:293791 | 7/25 (28%) | ||
wdsub1 | XP_002933313.1 | WD40 | 5..307 | CDD:238121 | 82/311 (26%) |
WD40 repeat | 16..52 | CDD:293791 | 10/38 (26%) | ||
WD40 repeat | 57..93 | CDD:293791 | 8/35 (23%) | ||
WD40 repeat | 101..136 | CDD:293791 | 9/34 (26%) | ||
WD40 repeat | 143..177 | CDD:293791 | 11/37 (30%) | ||
WD40 repeat | 183..234 | CDD:293791 | 11/50 (22%) | ||
WD40 repeat | 240..264 | CDD:293791 | 9/27 (33%) | ||
WD40 repeat | 282..306 | CDD:293791 | 7/25 (28%) | ||
SAM_superfamily | 327..397 | CDD:387673 | |||
RING_Ubox | 402..473 | CDD:388418 | |||
U-box domain, a modified RING finger | 408..443 | CDD:319569 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D957291at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |