DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACXB and gcy-25

DIOPT Version :9

Sequence 1:NP_620474.2 Gene:ACXB / 53427 FlyBaseID:FBgn0040509 Length:1114 Species:Drosophila melanogaster
Sequence 2:NP_001294116.1 Gene:gcy-25 / 191653 WormBaseID:WBGene00001549 Length:1034 Species:Caenorhabditis elegans


Alignment Length:592 Identity:122/592 - (20%)
Similarity:225/592 - (38%) Gaps:179/592 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 LIYIQIVN-DKFT-ICV----ECIVIDMVVFT---FLTSLLFISWFKKVCWWRCVENDSRKYGRV 651
            |.|:...| :.|| ||.    |.||  |..||   .|..|:|:.              .:|:|| 
 Worm   518 LKYMSHTNINPFTGICFNQGSELIV--MWQFTTRYSLEDLIFVK--------------EQKFGR- 565

  Fly   652 SCKLFKIWERIQHSFVLRVTIYMSIVASYYLLI--STILLNCDKNQYEL---------DVINSKL 705
                     ..|.:|:..:...::.:.:..:.:  :..|.||..:.|.:         .::..:.
 Worm   566 ---------NFQSTFIKHIVHGINYIHNSSIKVHGALYLSNCVVDSYWVVKLTDFGIKGILKERT 621

  Fly   706 YHYDIVTDNCFNPWVFTDMISLIVGVSYTFARI-PFALKMLI--------TCCATVAYLVIVFFQ 761
            .|.::...:.|:          :..:.|.:.:: |..:..::        |....:..|.:..:|
 Worm   622 NHKELAPSSAFD----------VDAIHYKYLQLAPEHISAILEKLEEPRGTVEGDIYQLAMCIYQ 676

  Fly   762 YSFIFEHSATTTPFMKAELAHCL----------------RVCMMLLTMY---------AKERQSE 801
            ..|.....|.....:| ||||.|                ...|.||::.         |:....:
 Worm   677 ILFYMRPFAERQESIK-ELAHLLSSQSTAPLHPKVPEGNSFTMRLLSIIQQCWLYKPAARPALIK 740

  Fly   802 FNTKINFKINQDLQG-----------------KQKAADITNK-----SII-ILLTNILPSHVVEV 843
            ....:|.:..||::|                 :|..|:.|.:     |:. .||..:||..|.  
 Worm   741 ITDAVNREFGQDVKGTLIDQMIEMIDEYSANLEQIVAERTRELEQDMSVTENLLYQLLPKSVA-- 803

  Fly   844 YLDSV-ANHELYYENYKMVSVMFAMLINFQ------MDLPSLRVLNDIITEFDRLLNAYKEYYVV 901
              ||: :...:..|.:..|:::...:..|.      :.:..|..|.::.:.||.::...|.:   
 Worm   804 --DSIRSGKTVVPEQHSSVTLLVVDVCQFTKFCEAFIPVHILETLQELYSSFDNIVQKNKAF--- 863

  Fly   902 EKIKVVGCTYMAACGLDFTLAKSKFGSRTHASYSSELEQVLYRKESKGTENDHDEVAFIMTTFAL 966
             |::.||..|:...|:                  .|:....:.:|              :...:|
 Worm   864 -KVENVGDAYLICSGI------------------PEMSGFRHLRE--------------ICKISL 895

  Fly   967 DLMRVLSVCNKAYAGRPFDRALSTGEICIGISTGEIMAGVVGASQPHYDIWGNPVNMASRMESTG 1031
            .|...:    |.:..|  .|...|.:|.:||::|.:.||::|::.|.:.|:|:.||||.||.|||
 Worm   896 KLQAFM----KTFKVR--HRPSHTLQIKMGITSGAVAAGILGSTAPRFCIFGDTVNMACRMASTG 954

  Fly  1032 LPGHIHVTQETAN-ILEQF-DIMCMYRGMTFVKGRGEIPTYFV-GIDDNLKFLPSNVKKNNMSKR 1093
            .||.|.:::.||| ::|:| ..|...|||..|||:|...|::: |..|.::         ..|.|
 Worm   955 NPGSIQLSELTANTLMEKFPSFMLEERGMIDVKGKGACLTFWLTGEKDIMR---------RQSSR 1010

  Fly  1094 FSILSSL 1100
            .|.:|.:
 Worm  1011 SSCISQI 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXBNP_620474.2 AC_N <36..276 CDD:292831
CYCc 249..459 CDD:214485
Nucleotidyl_cyc_III 298..484 CDD:299850
CYCc 825..1047 CDD:214485 54/235 (23%)
Nucleotidyl_cyc_III 853..1072 CDD:299850 57/226 (25%)
gcy-25NP_001294116.1 PBP1_iGluR_N_LIVBP_like 56..>230 CDD:107346
PKc_like 473..746 CDD:304357 44/264 (17%)
SPS1 474..>736 CDD:223589 44/254 (17%)
HNOBA <764..805 CDD:285003 9/44 (20%)
CYCc 790..976 CDD:214485 55/231 (24%)
Nucleotidyl_cyc_III 812..999 CDD:299850 57/228 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.