DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACXB and gcy-23

DIOPT Version :9

Sequence 1:NP_620474.2 Gene:ACXB / 53427 FlyBaseID:FBgn0040509 Length:1114 Species:Drosophila melanogaster
Sequence 2:NP_500309.3 Gene:gcy-23 / 191652 WormBaseID:WBGene00001548 Length:1073 Species:Caenorhabditis elegans


Alignment Length:383 Identity:86/383 - (22%)
Similarity:180/383 - (46%) Gaps:62/383 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 DVFVLCMI-----YMFLPIPSIRGAALLATSVSLMYIGLFIYFLKSDDEDISEVVHDLDTICVDI 208
            |::...|:     :..||.|:       .|:||.:     :.:::...:.....|||...|..| 
 Worm   727 DIYAFGMVMHEILFRALPFPN-------GTNVSEV-----MDYIRDGTKTFRPTVHDRTQIHPD- 778

  Fly   209 FHYLGFNLMGIFFRIMNDT-MVRSSFLDRHQFLKEEMWLRQARQQESMLLDSI--LPPQIAKPIQ 270
                   |:.:.....|:. .||.|.  |...|..|.:|:    .:..|:|.:  :..|.|..::
 Worm   779 -------LVALLLDCWNENPEVRPSI--RRVRLNTENYLK----VKGSLVDQMMRMMEQYANNLE 830

  Fly   271 QSIKERI-MLSETD--SDRI--------VVNARRTENFMAIQIHPDVSILYADVVNYTHLTTTLT 324
            :.:.||. ||.|.:  :|::        |.|..:....:..:.....:::::|:|.:|.:.::.|
 Worm   831 KLVAERTGMLEEANVRADKLLGQLLPKYVANELKMGRSVPAKTFDMATVMFSDIVGFTTICSSST 895

  Fly   325 VEKLVKVLHDLYGRFDMAASTFKVQRIKFLGDCYYCVAGLGEAD-PDHAR--MAVSLGISMIANI 386
            ..::|.:|:.:|.:||.|.:.....:::.:||.|..|:|:.|.: .:|.|  ...:|.:.::...
 Worm   896 PLEVVSMLNSIYSKFDDAINKHGSYKVETIGDAYMIVSGIPEENGNEHIRNICNTALELMLLLKT 960

  Fly   387 QEVRAHRALDIDMRIGVHSGTLLAGVIGQAKLQYDIWGPDVDIANRLEATGKPGYVHVSGRTLSS 451
            .|:...|.:.:.:|:|:|:||:.|||:|....:|.::|..|::|:|:|:|.:|..:.:| :....
 Worm   961 YEIPHRRNVKLRIRLGIHTGTVAAGVVGLTAPRYCLFGDTVNVASRMESTSEPEKIQMS-QEARD 1024

  Fly   452 LNVAEYTVFP----GTEVAQSDPILQKQPMTTYLLTAAPSRNSVRSVDAVHSYAEIDI 505
            ..|..|:.|.    ||..|:.     |.|:|:|.|....|.:.::.    .:::::.|
 Worm  1025 FCVRYYSEFQITLRGTVEAKG-----KGPVTSYWLLGKQSESQMQQ----QNFSQLGI 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXBNP_620474.2 AC_N <36..276 CDD:292831 26/134 (19%)
CYCc 249..459 CDD:214485 53/225 (24%)
Nucleotidyl_cyc_III 298..484 CDD:299850 50/192 (26%)
CYCc 825..1047 CDD:214485
Nucleotidyl_cyc_III 853..1072 CDD:299850
gcy-23NP_500309.3 Periplasmic_Binding_Protein_Type_1 38..407 CDD:299141
ANF_receptor 38..385 CDD:279440
PK_GC 509..806 CDD:270894 20/100 (20%)
HNOBA <817..863 CDD:285003 10/45 (22%)
CYCc 842..1035 CDD:214485 46/193 (24%)
Guanylate_cyc 869..1056 CDD:278633 50/192 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.