DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACXB and odr-1

DIOPT Version :10

Sequence 1:NP_620474.2 Gene:ACXB / 53427 FlyBaseID:FBgn0040509 Length:1114 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:324 Identity:76/324 - (23%)
Similarity:135/324 - (41%) Gaps:85/324 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   810 INQDLQGKQKAADITNKSIII--------------LLTNILPSHVVEVYLDSVANHELYYENYKM 860
            ::|.::..:|.||...:.:.|              ||..:||:.:.:...:.:.   :...:|:.
 Worm   776 VDQMIRMSEKYADELEQMVAIRTADLADAQMQTMRLLNEMLPASIAKDLKNGLI---MPPRSYES 837

  Fly   861 VSVMFAMLINF----QMDLPS--LRVLNDIITEFDRLLNAYKEYYVVEKIKVVGCTYMAACGLDF 919
            .:|||..:.:|    :...|.  :..||||..:||.::..:..|    |::..|.|||.|.|:..
 Worm   838 ATVMFVQICDFNALMKRSSPEQVIAFLNDIYDQFDTVIKRHDAY----KVETTGETYMVASGVPH 898

  Fly   920 TLAKSKFGSRTHASYSSELEQVLYRKESKGTENDHDEVAFIMTTFALDLMRVLSVC----NKAYA 980
                                           ||:...: |.:...:|::..:..:.    :|.|.
 Worm   899 -------------------------------ENEGRHI-FEVAEISLEIREISYIYVLQHDKNYK 931

  Fly   981 GRPFDRALSTGEICIGISTGEIMAGVVGASQPHYDIWGNPVNMASRMESTGLPGHIHVTQETANI 1045
            .|          |.||...|.|.|||:|...|.|.::|:.||.||||:|...|..|..::.||.:
 Worm   932 LR----------IRIGFHAGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITARL 986

  Fly  1046 L-EQFDIMCMYRGMTFVKGRGEIPTYFVGIDDNLKF-----LPSNVKKNNMSKRFSILSSLVPV 1103
            | :..:...:.||:..|||:||:..|:  ::::|..     ||......|..:|    .|:||:
 Worm   987 LFDSHEYKFVKRGIVHVKGKGEVNCYW--LNEHLHEETEPPLPPMTPVPNPLRR----GSIVPL 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACXBNP_620474.2 AcyC 85..452 CDD:441717
Nucleotidyl_cyc_III 298..484 CDD:448371
Nucleotidyl_cyc_III 853..1072 CDD:448371 59/229 (26%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:471960
PK_GC 495..768 CDD:270894
CYCc 803..996 CDD:214485 55/241 (23%)
Blue background indicates that the domain is not in the aligned region.

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