DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alk and EDR1

DIOPT Version :9

Sequence 1:NP_001261027.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:NP_563824.1 Gene:EDR1 / 837393 AraportID:AT1G08720 Length:933 Species:Arabidopsis thaliana


Alignment Length:352 Identity:101/352 - (28%)
Similarity:154/352 - (43%) Gaps:58/352 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1159 DDSNLNNFNP------NYGCDGILNGHIDVNSL---------PQVARDS-----------LQLVN 1197
            |:|::::...      :.|||..|..|...:|.         |||..|:           |.:..
plant   609 DESHIHDHRKYTSDDISTGCDPRLKDHESTSSSLDSTSYRNDPQVLDDADVGECEIPWNDLVIAE 673

  Fly  1198 ALGKGAFGEVYMALYRHRDGDAVEMGVAVKTLREDPKREKEEDFLKEAAIMAKFNHPNMVHLIGV 1262
            .:|.|::||||     |.|....|:.|. |.|.:|.......:|..|..||.:..|||:|..:|.
plant   674 RIGLGSYGEVY-----HADWHGTEVAVK-KFLDQDFSGAALAEFRSEVRIMRRLRHPNVVFFLGA 732

  Fly  1263 CFDRQPYYIVLELLAGGDLQKFLRENRNTPERPSLLTMKDLLFCALDVAKG--CRYMESKRFIHR 1325
            ........||.|.|..|.|.:.|...::..:....:.|      |||||.|  |.:..:...:||
plant   733 VTRPPNLSIVTEFLPRGSLYRILHRPKSHIDERRRIKM------ALDVAMGMNCLHTSTPTIVHR 791

  Fly  1326 DIAARNCLLSSKGPGRVVKIADFGMSRDIYRSDYYRKGGKAMLPIKWMPPEAFLDGIFTSKTDVW 1390
            |:...|.|:.:...   ||:.|||:|| :..:.:......|..| :||.||...:.....|.||:
plant   792 DLKTPNLLVDNNWN---VKVGDFGLSR-LKHNTFLSSKSTAGTP-EWMAPEVLRNEPSNEKCDVY 851

  Fly  1391 SFGILLWEVFSLGRSPYPGQHNTQVMELV-VRGGRLGSPTECPVSIYKVMADCWNPTPEDRPTFI 1454
            |||::|||:.:| |.|:.|.:..||:..| .:..||..|.|....:.:::.:||...|..||:|.
plant   852 SFGVILWELATL-RLPWRGMNPMQVVGAVGFQNRRLEIPKELDPVVGRIILECWQTDPNLRPSFA 915

  Fly  1455 TLLEHLTACTQDASIMNAPLPNILGPT 1481
            .|.|.|           .||..::.||
plant   916 QLTEVL-----------KPLNRLVLPT 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_001261027.1 MAM 288..450 CDD:279023
MAM 288..447 CDD:99706
MAM 505..691 CDD:279023
MAM 505..689 CDD:99706
PTKc_ALK_LTK 1186..1462 CDD:270632 89/289 (31%)
TyrKc 1193..1460 CDD:197581 84/269 (31%)
EDR1NP_563824.1 EDR1 129..327 CDD:291079
Pkinase_Tyr 669..921 CDD:285015 84/269 (31%)
STKc_MAP3K-like 675..921 CDD:270901 83/263 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.