DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alk and drl

DIOPT Version :9

Sequence 1:NP_001261027.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:NP_001260566.1 Gene:drl / 44355 FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster


Alignment Length:490 Identity:121/490 - (24%)
Similarity:209/490 - (42%) Gaps:96/490 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1008 GGDVYLTESNGEG--GSSYISPSRSLREISE--IHAGASSG--------------PGAIIIIPAI 1054
            |||::..:.|.|.  .:.:.:|.:....::|  :..|.|.|              |.|..::..|
  Fly   183 GGDIHYVDRNDEHVVANGHQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVPPASGLVTLI 247

  Fly  1055 EGCGCDYRCVALDEFRSKVR-CICPDGWSLKRDNHTACEIREEAGKSSFQYLVSILMISLAVLFI 1118
            .|     ..:||....:.:. ..|..|.|.:..::....|:    .||||.|.:|...:...:::
  Fly   248 VG-----GILALVLVSTLILIAYCAKGPSKRHPSNGVHLIK----TSSFQRLPTISSTAHNSIYV 303

  Fly  1119 CIA------ALIFMLYNRYQRKKQSKKRHKMLVEQDLQLTRLRNNIDDSNLNNFNPNYGCDGILN 1177
            |.:      |.:...:..|:.:.:...|.  |.|..:|..|:|                      
  Fly   304 CPSTITPTYATLTRPFREYEHEPEEFNRR--LQELTVQKCRVR---------------------- 344

  Fly  1178 GHIDVNSLPQVARDSLQLVNALGKGAFGEVYMALYRHRDGDAVEMGVAVKTLREDPKREKEEDFL 1242
                ::.|.|             :|.||.:|...|    .|..|  |.|||:.:...:.:....|
  Fly   345 ----LSCLVQ-------------EGNFGRIYRGTY----NDCQE--VLVKTVAQHASQLQVNLLL 386

  Fly  1243 KEAAIMAKFNHPNMVHLIGVCFDRQPYYIVLELLAGG--DLQKFLRENRNTPERPSLLTMKDLLF 1305
            :|:.::.:.:|||::.::|:..:......||....|.  :|:.||::    |.....:|....:.
  Fly   387 QESMMLYEASHPNVLSVLGISIEDYATPFVLYAATGSVRNLKSFLQD----PSYARSVTTIQTVL 447

  Fly  1306 CALDVAKGCRYMESKRFIHRDIAARNCLLSSKGPGRVVKIADFGMSRDIYRSDYYRKGGKAMLPI 1370
            ....:|....::.:...||:|||||||::..:   ..||:.|..:|||::..||...|.....||
  Fly   448 MGSQLAMAMEHLHNHGVIHKDIAARNCVIDDQ---LRVKLTDSALSRDLFPGDYNSLGDGEYRPI 509

  Fly  1371 KWMPPEAFLDGIFTSKTDVWSFGILLWEVFSLGRSPYPGQHNTQVMELVVRGG-RLGSPTECPVS 1434
            ||:..||.....:...:||||||:|:||:.:||:.|| .:.:...||..::.| ||..|..||..
  Fly   510 KWLSLEALQKSHYNEGSDVWSFGVLMWEMCTLGKLPY-AEIDPYEMEHYLKDGYRLAQPFNCPDE 573

  Fly  1435 IYKVMADCWNPTPEDRPTF----ITLLEHLTACTQ 1465
            ::.:||.||...|.:||:|    |.|.|..|..|:
  Fly   574 LFTIMAYCWASMPAERPSFSQLQICLSEFHTQITR 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_001261027.1 MAM 288..450 CDD:279023
MAM 288..447 CDD:99706
MAM 505..691 CDD:279023
MAM 505..689 CDD:99706
PTKc_ALK_LTK 1186..1462 CDD:270632 83/282 (29%)
TyrKc 1193..1460 CDD:197581 82/273 (30%)
drlNP_001260566.1 WIF 21..157 CDD:128745
PTK_Ryk 336..606 CDD:270639 88/322 (27%)
Pkinase_Tyr 343..599 CDD:285015 83/308 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455369
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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