DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alk and htl

DIOPT Version :9

Sequence 1:NP_001261027.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster


Alignment Length:577 Identity:169/577 - (29%)
Similarity:258/577 - (44%) Gaps:139/577 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1009 GDVYLT---ESNGEGGSSYISPSRSLREISEIHAGASSGPGAIIIIP--AIEGCGCDYRCVALDE 1068
            |.:.||   .|.|.....|:|...|.:              |.|.:|  .:..|..:...:|.|:
  Fly   204 GPLNLTLVVNSTGSMHCKYLSDLTSKK--------------AWIFVPCHGMTNCSNNRSIIAEDK 254

  Fly  1069 FR---SKVRCICPDGW-------SLKRDNHTAC--EIRE----EAG-------KSSFQYLV---S 1107
            .:   ..|| :..:||       ||.:.|.||.  .:|.    |||       .:||.|:.   .
  Fly   255 DQLDFVNVR-MEQEGWYTCVESNSLGQSNSTAYLRVVRSLHVLEAGVASGSLHSTSFVYIFVFGG 318

  Fly  1108 ILMISLAVLFICIAALIFMLYNRYQRKKQSKKRHKMLVEQDLQLTRLRNNIDDSNLNNFNPNYGC 1172
            ::.|.:..||:..|.          ||.:.:|..|..:|...|.|:        .:..|.|..|.
  Fly   319 LIFIFMTTLFVFYAI----------RKMKHEKVLKQRIETVHQWTK--------KVIIFKPEGGG 365

  Fly  1173 DGILNGHIDVNSLP--------------------------------QVARDSLQLVNALGKGAFG 1205
            |.  :|.:|...:|                                ::.|..|.|...||:||||
  Fly   366 DS--SGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFG 428

  Fly  1206 EVYMALYRHRDGDAVEMGVAVKTLREDPKREKEEDFLKEAAIMAKF-NHPNMVHLIGVCFDRQPY 1269
            .|.||    ...:|:   ||||.::|....:.....::|..:|... .|.|:::|:|.|....|.
  Fly   429 RVVMA----EVNNAI---VAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPL 486

  Fly  1270 YIVLELLAGGDLQKFLRENR-----------NTPERP--SLLTMKDLLFCALDVAKGCRYMESKR 1321
            |:::|....|:|:.||.:||           ..|..|  .::|.|||:..|..:|:|..|:.|:|
  Fly   487 YVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRR 551

  Fly  1322 FIHRDIAARNCLLSSKGPGRVVKIADFGMSRDIYRSDYYRKGGKAMLPIKWMPPEAFLDGIFTSK 1386
            .||||:||||.|:|.   ..|:||||||::|||..:|||||.....||||||.||:..:..:.||
  Fly   552 CIHRDLAARNVLVSD---DYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSK 613

  Fly  1387 TDVWSFGILLWEVFSLGRSPYPG-QHNTQVMELVVRGGRLGSPTECPVSIYKVMADCWNPTPEDR 1450
            :||||:||||||:.:.|:.|||. ....::...::.|.|:..|.:|.::||.:|..||:...:||
  Fly   614 SDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDR 678

  Fly  1451 PTFITLLEHLTACTQ------DASIMNAPLPNILGPTAS--ERDDTVIRPPNGEEFC 1499
            |.|..::|::....|      |..|.|...|    |:.|  |.|:|    .|.:::|
  Fly   679 PPFTEIVEYMDKLLQTKEDYLDVDIANLDTP----PSTSDEEEDET----DNLQKWC 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_001261027.1 MAM 288..450 CDD:279023
MAM 288..447 CDD:99706
MAM 505..691 CDD:279023
MAM 505..689 CDD:99706
PTKc_ALK_LTK 1186..1462 CDD:270632 110/322 (34%)
TyrKc 1193..1460 CDD:197581 108/281 (38%)
htlNP_524394.2 Ig 112..191 CDD:299845
IG_like 113..191 CDD:214653
IG_like 205..289 CDD:214653 22/98 (22%)
PKc_like 404..692 CDD:304357 109/297 (37%)
STYKc 416..688 CDD:214568 108/281 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455247
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.