DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alk and tor

DIOPT Version :9

Sequence 1:NP_001261027.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster


Alignment Length:554 Identity:137/554 - (24%)
Similarity:213/554 - (38%) Gaps:182/554 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1110 MISLAVLFICIAALIFMLYN-RYQRKKQSKKRHKMLVEQDLQLTRLRNNIDDSNLNNFNPNYGCD 1173
            |:.|.:..|.....|.||.: .:.|:.:|:.:...:..:|.:.:....::.||:           
  Fly   397 MVKLVLFIIVPICCILMLCSLTFCRRNRSEVQALQMDAKDAKASEFHLSLMDSS----------- 450

  Fly  1174 GIL-----NGHIDVNSLPQVARDSLQLVNALGKGAFGEVYMALYRHRDGDAVEMGVAVKTLREDP 1233
            |:|     |..::|....:|...|:.|.:.||:||||.|...:|:.|.       ||||.|:::|
  Fly   451 GLLVTLSANESLEVMDELEVEPHSVLLQDVLGEGAFGLVRRGVYKKRQ-------VAVKLLKDEP 508

  Fly  1234 KREKEEDFLKEAAIM-AKFNHPNMVHLIGVC--FDRQPYYIVLELLAGGDLQKFLREN------- 1288
            ..|....|..|..:: |...|||:|.::|..  |..| ..:::|..:.|.||.||||.       
  Fly   509 NDEDVYAFKCEIQMLKAVGKHPNIVGIVGYSTRFSNQ-MMLLIEYCSLGSLQNFLREEWKFRQEQ 572

  Fly  1289 ----------------------RNT---------------------------------------- 1291
                                  ||:                                        
  Fly   573 NAIGLKKNLEQNVDNRRFNRLPRNSIHDRIEDINNSMLSTVEEESESDQTHSSRCETYTLTRITN 637

  Fly  1292 --------------------------------------PERPSLLTMK----------------- 1301
                                                  |::.|....|                 
  Fly   638 AADNKGYGLEDIENIGGSYIPKTAEAPKDRPKRKLKPQPKKDSKQDFKSDNKKRIFENKEYFDCL 702

  Fly  1302 --------------DLLFCALDVAKGCRYMESKRFIHRDIAARNCLLSSKGPGRVVKIADFGMSR 1352
                          |||..|..||.|..::...:.:|||:||||.|:|   ..|.:||||||:||
  Fly   703 DSSDTKPRIPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLIS---VDRSIKIADFGLSR 764

  Fly  1353 DIYRSDYYRK-GGKAMLPIKWMPPEAFLDGIFTSKTDVWSFGILLWEVFSLGRSPYPGQHNTQVM 1416
            |:|..:.||| ||...|||||:..|:....::||::||||||:||:|:.:||..|||....:.::
  Fly   765 DVYHENVYRKSGGSGKLPIKWLALESLTHQVYTSQSDVWSFGVLLYEITTLGGMPYPSVSPSDLL 829

  Fly  1417 ELVVRGGRLGSPTECPVSIYKVMADCWNPTPEDRPTFITLLEHLTACTQDASIMNAPLPNILGPT 1481
            :|:.:|.|:..|..|...::.:|..||:..|..||||..|...|.......:.:...|..:...|
  Fly   830 QLLRQGHRMKRPEGCTQEMFSLMESCWSSVPSHRPTFSALKHRLGGMILATNDVPERLKQLQAAT 894

  Fly  1482 ASE------RDDTVIRPPNGEEFCLAVPDYLVPL 1509
            .|:      .:..|.:.|..||.      ||.||
  Fly   895 ESKLKSCDGLNSKVEQVPCEEEL------YLEPL 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_001261027.1 MAM 288..450 CDD:279023
MAM 288..447 CDD:99706
MAM 505..691 CDD:279023
MAM 505..689 CDD:99706
PTKc_ALK_LTK 1186..1462 CDD:270632 111/417 (27%)
TyrKc 1193..1460 CDD:197581 108/408 (26%)
torNP_476762.1 FN3 199..261 CDD:214495
STYKc 475..873 CDD:214568 108/408 (26%)
PTKc 479..873 CDD:270623 107/404 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24416
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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