DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alk and Mst1r

DIOPT Version :9

Sequence 1:NP_001261027.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:XP_038937153.1 Gene:Mst1r / 300999 RGDID:1306465 Length:1418 Species:Rattus norvegicus


Alignment Length:1470 Identity:324/1470 - (22%)
Similarity:508/1470 - (34%) Gaps:502/1470 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 SRDFRIVFEVVPDLRVGQKGH--------------VALDNLRMVNCFPEGTKSEKCSTSQVKCTS 467
            ||||.:.: |||....|.:..              ||:.| |:....|:....|..:|..:    
  Rat    39 SRDFSVKY-VVPSFSAGGRVQATAVYEDSKNSAVFVAIRN-RLHVLGPDLQYIESLTTGPI---- 97

  Fly   468 SKVPVCIHLPRICDITRDCDEAEDEQQSCDKIPYGGRCDFEE------------DWCGWRDSGKT 520
             ..|.|          :.|       .||...|:|...|.:.            ..||....|:.
  Rat    98 -GDPGC----------QTC-------ASCGPGPHGPPNDTDTLVLVMEPGLPALVSCGSTLQGRC 144

  Fly   521 TLTWSRHTGSSPTHDTGPDG-----------------------DHTMQHL--------QNNTSGY 554
            .|           |:..|.|                       |....||        |.:.|.:
  Rat   145 FL-----------HELEPQGEALHLAAPACLFSASNNKPEACTDCVASHLGTRVTVVEQGHASYF 198

  Fly   555 YMLVNMNQHMNNSEKNSIIGFASNAIMVSKT------FNPP-PSVHGNPDSPYRNSCVVRFFIHQ 612
            |:..:::..:..|       |:..::.:.:.      |.|. ||:...|  .|..|.::: ::|.
  Rat   199 YVASSLDPELAAS-------FSPRSVSIRRLKSDTSGFQPGFPSLSVLP--KYLASYLIK-YVHS 253

  Fly   613 FG---------------KNPGS------INLSVV--EMKEKENITTTLWWSTKN----------Q 644
            |.               ::|.|      :.|:.:  |:.:...:.....::.|.          |
  Rat   254 FHSGDFVYFLTVQPMDVRSPPSALQTRLVRLNAIEPEIGDYRELVLDCHFAPKRRRRSGAPKSLQ 318

  Fly   645 GSDWMRAEYVLPNITSKYYLQFEARMGMRIYSD--VAVDDFSLSPECFGLNIPEDHLG------- 700
            ....::|.:..| :.:|..|......|..:...  |||.|.|..|.......|.:||.       
  Rat   319 AYQVLQAAHSAP-VDAKLALDLSISEGQEVLFGVFVAVKDSSSGPNSVVCAFPINHLDNLIEEGV 382

  Fly   701 ----------------GYNYWDVRQNLKSPTYKDFEYTNYLELTTCDT-------RGMIGPSQAQ 742
                            |.:::.......:|........:|..|...|:       .|::|..:..
  Rat   383 ERCCHPSNSSLLTRRRGLDFFQTPSFCPNPPGAPSSRCHYFPLMVHDSFTRVDLFNGLLGSVKVT 447

  Fly   743 CEAAYREQNKT--------------HVLREVHVVEDQSSY-----------------------KG 770
            .....|..|.|              .:.|.::.:...|::                       .|
  Rat   448 ALHVTRLGNVTVAHMGTEDGRILQVEIARSLNYLLYVSNFSLGSSGQPVHQDVSRLGNDLLFASG 512

  Fly   771 MQKWKVPHE----GHYTIIAK--GASGGLGSGGVGSSRGS------------VAVAILELHKNEE 817
            .|.:|||.:    ||:....:  .|...:|.|..|...|.            ....|.|.|.:..
  Rat   513 DQVFKVPIQGPGCGHFLTCWRCLRAQRFMGCGWCGDRCGRQKECPGSWQQDYCPPEITEFHPHSG 577

  Fly   818 LYFLVGQQ-----GENACIKSMGVLKEAGCGTDHDLDLAQYSFR------------SKQDMVKNI 865
            .  |.|..     |.|..::..||:.|   || |.:.:.|...|            |:::.::.:
  Rat   578 P--LRGTTRLTLCGSNFYLRPDGVVPE---GT-HQITVGQSPCRLLPKDSSTRRSGSQKEFIEEL 636

  Fly   866 YIENGAGGGGGGSYVFLLNQAKNEAV-----PLLVAGGGGGLGI---GQYIDEDFQHGQ----KA 918
            ..|              |...:.:||     .||:.....|...   |..:.|||...:    ..
  Rat   637 ECE--------------LEPLETQAVGTTNISLLITNMPAGKHFRVEGVSVREDFSFMEPMLTSI 687

  Fly   919 KPLQAPESG----QINGEPLNKKTA------------------------GPGGGWRAKEDQALSP 955
            ||...|.:|    .:.|:.|:..|:                        .||.|   .....|..
  Rat   688 KPDFGPRAGGTYLTLEGQSLSVGTSRAVLVNGTQCRLEQVSEEKILCVTPPGAG---TASVPLRL 749

  Fly   956 TYGAALLQGGRGGHSCYVE---LAD-------NGTSVHRHGQG---------GFGGGGGGCNTGG 1001
            ..|.|.::|.|..|  |.|   :.|       :|:.|..|||.         .|..|.....:..
  Rat   750 QIGGAEVRGSRTFH--YKEDPIVLDISPKCGYSGSHVMVHGQHLTSAWHLTVSFNDGQSIVESRC 812

  Fly  1002 GG-------------------GGYAGGDVYLTESNGEGGSSYISPS-RSLREISEIHAGASSGPG 1046
            .|                   .|:|.|::.|.   |:|.:.:..|. |.|...|.    ..:|| 
  Rat   813 AGQFLEQQHQCRLPEYMVRNPQGWATGNLSLW---GDGAAGFTLPGFRFLPPPSL----PRTGP- 869

  Fly  1047 AIIIIP-----AIE--GCGCDYRCVALD----------EFRSKVRCICP---------DGWSLKR 1085
             :::.|     .:|  |.|....||.::          |.|..| .|||         ||..|:.
  Rat   870 -VLLKPEEHSVKVEYIGLGAVADCVTVNVTVGGEVCQHELRGDV-VICPLPPSLQLGKDGVPLQV 932

  Fly  1086 DNHTACEI-----REEAGKSSFQYLVSILMISLAVLFICIAAL-IFMLYNRYQRKKQSKKRHKM- 1143
            .....|.|     |...|::|.:    .|:|:|..|.:.:|.| |.::.|..:||||......: 
  Rat   933 CVDGGCHILGQVVRSGPGRASQR----TLLIALLALILLVAGLAIALVCNSRRRKKQLVLTPNLD 993

  Fly  1144 -LVEQDL-----QLTRLRNNIDDSN-LNNFNPNY-----GCDGILNGHIDVNSLPQVARDSLQLV 1196
             |..:||     .|:..|:..|..| |.:..||:     |.||        .|:|.:..||::|.
  Rat   994 DLTSRDLSPRAMSLSIFRSGSDYRNGLASRPPNHEESSEGQDG--------TSVPLLRTDSIRLQ 1050

  Fly  1197 N-------------------------ALGKGAFGEVYMALYRHRDGDAVEMGVAVKTLREDPKRE 1236
            :                         .:|||.||.||...|  .|....::..|:|:|....:.:
  Rat  1051 DLDKMLLAEVKDVLIPHEQVVIHTDQVIGKGHFGVVYHGEY--TDEAQNQIHCAIKSLSRITEVQ 1113

  Fly  1237 KEEDFLKEAAIMAKFNHPNMVHLIGVCFDRQPY-YIVLELLAGGDLQKFLRENRNTPER------ 1294
            :.|.||:|..||...:|||::.|||:....:.. .::|..:..|||.:|:|    :|:|      
  Rat  1114 EVEAFLREGLIMRGLHHPNILALIGIMLPPEGLPRVLLPYMRHGDLLRFIR----SPQRVSAQCP 1174

  Fly  1295 -------------------PSLLTMKDLLFCALDVAKGCRYMESKRFIHRDIAARNCLLSSKGPG 1340
                               |...|:|||:...|.||.|..|:..::|:|||:|||||:|..   .
  Rat  1175 GWGVSASTHLCRCSPVSSCPQNPTVKDLISFGLQVACGMEYLAEQKFVHRDLAARNCMLDE---S 1236

  Fly  1341 RVVKIADFGMSRDIYRSDYY--RKGGKAMLPIKWMPPEAFLDGIFTSKTDVWSFGILLWEVFSLG 1403
            ..||:||||::|.|...:||  |:...|.||:|||..|:.....||:|:||||||:||||:.:.|
  Rat  1237 FTVKVADFGLARGILDKEYYSVRQHRHARLPVKWMALESLQTYRFTTKSDVWSFGVLLWELLTRG 1301

  Fly  1404 RSPYPGQHNTQVMELVVRGGRLGSPTECPVSIYKVMADCWNPTPEDRPTFITLL----------- 1457
            ..|||......:...:|:|.||..|..||.|:|:||..||...|..||||..|:           
  Rat  1302 APPYPHIDPFDLSHFLVQGRRLPQPEYCPDSLYQVMLRCWEADPAARPTFRALVLEVEQVASSLL 1366

  Fly  1458 -EHLTACTQDASIMNAPLPNILGPTASERDDTVIRPPNGE 1496
             :|....|  |:.:|      :||.|.  ||..:.|..|:
  Rat  1367 GDHYVQLT--AAYVN------VGPGAV--DDGSVFPEQGQ 1396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_001261027.1 MAM 288..450 CDD:279023 12/46 (26%)
MAM 288..447 CDD:99706 12/43 (28%)
MAM 505..691 CDD:279023 42/270 (16%)
MAM 505..689 CDD:99706 42/268 (16%)
PTKc_ALK_LTK 1186..1462 CDD:270632 111/340 (33%)
TyrKc 1193..1460 CDD:197581 107/331 (32%)
Mst1rXP_038937153.1 Sema_RON 29..521 CDD:200540 84/527 (16%)
PSI 524..566 CDD:396154 7/41 (17%)
IPT 567..681 CDD:417750 27/133 (20%)
IPT_plexin_repeat2 682..766 CDD:238584 17/88 (19%)
IPT 767..>828 CDD:214657 9/60 (15%)
PKc_like 1076..1364 CDD:419665 106/296 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1095
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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