DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alk and EPHB1

DIOPT Version :10

Sequence 1:NP_652600.1 Gene:Alk / 53425 FlyBaseID:FBgn0040505 Length:1701 Species:Drosophila melanogaster
Sequence 2:NP_004432.1 Gene:EPHB1 / 2047 HGNCID:3392 Length:984 Species:Homo sapiens


Alignment Length:525 Identity:143/525 - (27%)
Similarity:236/525 - (44%) Gaps:116/525 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1012 YLTESNGEGGSSYISPSRSLREISEIHAGASSGPGAIIIIP----AIEGCGCDYRCVALDEFRSK 1072
            |..:.:.|..||......:...|..:.      ||.:.::.    .:.|.|         :|..|
Human   471 YYEKEHNEFNSSMARSQTNTARIDGLR------PGMVYVVQVRARTVAGYG---------KFSGK 520

  Fly  1073 VRCICPDGWSLKRDNHTACEIREE----AGKSS--FQYLVSILMISLAVLFICIAALIFMLYNRY 1131
            : |.    .:|..|::.: |:||:    ||.::  ..::||::.||:    :|            
Human   521 M-CF----QTLTDDDYKS-ELREQLPLIAGSAAAGVVFVVSLVAISI----VC------------ 563

  Fly  1132 QRKKQSKKR--HKMLVEQDLQLTRLRNNIDDSNLNNFNPNYGCDGILNGHIDV-------NSLPQ 1187
                 |:||  .|..|..|             .|.:::...|..| :..:||.       .::.:
Human   564 -----SRKRAYSKEAVYSD-------------KLQHYSTGRGSPG-MKIYIDPFTYEDPNEAVRE 609

  Fly  1188 VARD----SLQLVNALGKGAFGEVYMALYRHRDGDAVEMGVAVKTLREDPKREKEEDFLKEAAIM 1248
            .|::    .:::...:|.|.|||||..  |.:.....|:.||:|||:.....::..|||.||:||
Human   610 FAKEIDVSFVKIEEVIGAGEFGEVYKG--RLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIM 672

  Fly  1249 AKFNHPNMVHLIGVCFDRQPYYIVLELLAGGDLQKFLRENRNTPERPSLLTMKDLLFCALDVAKG 1313
            .:|:|||::.|.||....:|..|:.|.:..|.|..|||:|      ....|:..|:.....:|.|
Human   673 GQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQN------DGQFTVIQLVGMLRGIAAG 731

  Fly  1314 CRYMESKRFIHRDIAARNCLLSSKGPGRVVKIADFGMSRDI--------YRSDYYRKGGKAMLPI 1370
            .:|:....::|||:||||.|::|   ..|.|::|||:||.:        |.|..   |||  :|:
Human   732 MKYLAEMNYVHRDLAARNILVNS---NLVCKVSDFGLSRYLQDDTSDPTYTSSL---GGK--IPV 788

  Fly  1371 KWMPPEAFLDGIFTSKTDVWSFGILLWEVFSLGRSPYPGQHNTQVMELVVRGGRLGSPTECPVSI 1435
            :|..|||.....|||.:||||:||::|||.|.|..||....|..|:..:.:..||..|.:||.::
Human   789 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPMDCPAAL 853

  Fly  1436 YKVMADCWNPTPEDRPTFITLLEHLTACTQDASIMNAPLPNILGPTASERDDTVIRPPNGEEFCL 1500
            :::|.|||......||.|..::.     |.|..|.|        |.:.:...|:...|:......
Human   854 HQLMLDCWQKDRNSRPRFAEIVN-----TLDKMIRN--------PASLKTVATITAVPSQPLLDR 905

  Fly  1501 AVPDY 1505
            ::||:
Human   906 SIPDF 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlkNP_652600.1 MAM 288..447 CDD:99706
MAM 505..689 CDD:99706
PTKc_ALK_LTK 1186..1462 CDD:270632 99/287 (34%)
EPHB1NP_004432.1 EphR_LBD_B1 20..195 CDD:198444
fn3 326..412 CDD:394996
fn3 435..518 CDD:394996 9/61 (15%)
EphA2_TM 542..616 CDD:464211 19/108 (18%)
PTKc_EphR_B 614..882 CDD:173638 100/288 (35%)
SAM_EPH-B1 908..975 CDD:188950 2/3 (67%)
PDZ-binding. /evidence=ECO:0000255 982..984
Blue background indicates that the domain is not in the aligned region.

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